Pairwise Alignments

Query, 455 a.a., UDP-N-acetylmuramate--L-alanine ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 481 a.a., UDP-N-acetylmuramate--alanine ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  397 bits (1020), Expect = e-115
 Identities = 216/449 (48%), Positives = 290/449 (64%), Gaps = 9/449 (2%)

Query: 6   IKKIHMVGIGGSGMSGIAEVLLNLGYEVCGSDMSDGTVVRRLRKLGAEIYIGHGEGNLTD 65
           I  +H VGIGG GMSGIAEVL NLGY V GSD+SD   V+RLR LG  I IGH   NL D
Sbjct: 8   IGPLHFVGIGGIGMSGIAEVLHNLGYRVQGSDLSDNANVKRLRDLGIPIAIGHKAANLGD 67

Query: 66  AQVLVKSTAIGDENPEVAAARKRGIPIIPRAEMLAELMRLRTGIAIAGTHGKTTTTSLTA 125
           AQV+V S+A+   NPEV  AR R +P++ RAEML ELMRL+  IA+AGTHGKTTTTSL A
Sbjct: 68  AQVVVISSAVKASNPEVMDARARFLPVVRRAEMLGELMRLKWSIAVAGTHGKTTTTSLVA 127

Query: 126 AIFDEAGTDPTVIIGGRLNAYGANARLGDGAYLIAEADESDGSFLCLFPIVTVVTNVDMD 185
            + D AG DPTVI GG LNA G NA LG G +++ EADESDG+F  L   +++VTN+D +
Sbjct: 128 QLLDAAGLDPTVINGGILNARGTNAYLGTGEWMVVEADESDGTFTKLPATISLVTNIDPE 187

Query: 186 HMDHYPSQQAIDDAFVDFMNKVPFYGMNVVCGDDPGVRRLLPRVK-RPVVTYGFGEGNAI 244
           H+D Y +   + +AF  F++ +PFYG   +C D P V+ ++P+++ R ++TYG      I
Sbjct: 188 HLDFYGTFDKVREAFRAFIHNLPFYGFACMCIDHPEVQAMIPQLQDRKIITYGLSPQADI 247

Query: 245 R-AEVLACADSSLFNVIV------NGDDIGQVRLAQPGRHNILNALAAIGVALECDIAPE 297
           R A V      + F+VI+          I  +RL   GRHN+LNAL AIG+A E  I   
Sbjct: 248 RGANVTLGPRGARFDVILTDRAGGGSRTIEGIRLPMYGRHNVLNALGAIGIAAEMGIDDA 307

Query: 298 KIVAGLAKFGGVGRRFERKGERDGVLVVDDYGHHPAEIAATLATARQCFPHRRLVVVFQP 357
            I  GL  F GV RRF R G+  GV V+DDYGHHP EIAA L  AR     R ++ V QP
Sbjct: 308 VIRDGLYHFEGVKRRFTRTGDAGGVTVIDDYGHHPVEIAAVLKAARDA-TEREVIAVVQP 366

Query: 358 HRFSRTQALFGEFCKVFDGVDKLLLTEIYPASEKPIPGVSGQSLAQGIRQVSKTDVTYHQ 417
           HR+SR  +LF +FC  F+  D++++ ++Y A E+PIPG S ++LA+G++      V    
Sbjct: 367 HRYSRLNSLFEDFCTCFNDADQVVVADVYAAGEQPIPGASKEALAEGLKVHGHKSVHVLT 426

Query: 418 DFDSVLAALPEVLQPGDLLLTLGAGNVTT 446
           +  ++   +  + +PGDL++ LGAG+++T
Sbjct: 427 NEQALPELIARIAKPGDLVVCLGAGSIST 455