Pairwise Alignments

Query, 455 a.a., UDP-N-acetylmuramate--L-alanine ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 484 a.a., UDP-N-acetylmuramate--alanine ligase (RefSeq) from Shewanella loihica PV-4

 Score =  447 bits (1150), Expect = e-130
 Identities = 234/446 (52%), Positives = 310/446 (69%), Gaps = 6/446 (1%)

Query: 5   KIKKIHMVGIGGSGMSGIAEVLLNLGYEVCGSDMSDGTVVRRLRKLGAEIYIGHGEGNLT 64
           ++K+IH VGIGG+GM GIAEVL+N GY + GSD+++  V  RL++LGA I+IGH    + 
Sbjct: 20  RVKRIHFVGIGGAGMGGIAEVLVNEGYRLSGSDIAENAVTARLKRLGAAIFIGHSADQVE 79

Query: 65  DAQVLVKSTAIGDENPEVAAARKRGIPIIPRAEMLAELMRLRTGIAIAGTHGKTTTTSLT 124
            A V+V STAI   NPE+ AA++R IPI+ RAEMLAELMR R G+A+AGTHGKTTTTSL 
Sbjct: 80  GADVVVVSTAIDASNPEILAAQERRIPIVRRAEMLAELMRYRHGVAVAGTHGKTTTTSLI 139

Query: 125 AAIFDEAGTDPTVIIGGRLNAYGANARLGDGAYLIAEADESDGSFLCLFPIVTVVTNVDM 184
           A+++ +A  DPT +IGG LN+ G NARLG   YLIAEADESD SFL L P+V+VVTN++ 
Sbjct: 140 ASVYGQAERDPTFVIGGLLNSAGTNARLGKSRYLIAEADESDASFLHLQPMVSVVTNIEA 199

Query: 185 DHMDHYPSQ-QAIDDAFVDFMNKVPFYGMNVVCGDDPGVRRLLPRVKRPVVTYGFGEGNA 243
           DHMD Y    + +   FVDF++ +PFYG+ V C DDP VR +LPR+ R VVTYGF E   
Sbjct: 200 DHMDTYEGDFEKLKSTFVDFLHNLPFYGVAVACIDDPVVREILPRIGRKVVTYGFSEDAD 259

Query: 244 IRA-EVLACADSSLFNVIVNGDDIGQVRLAQPGRHNILNALAAIGVALECDIAPEKIVAG 302
           ++A        SS F V   G     +R+  PGRHN+LNALAAI VA E +I  E I+  
Sbjct: 260 VQALNFEQQGYSSRFTVRREGMADLDLRVNLPGRHNVLNALAAIAVATEDEIEDEAIIRA 319

Query: 303 LAKFGGVGRRFERKGE----RDGVLVVDDYGHHPAEIAATLATARQCFPHRRLVVVFQPH 358
           L +F G+GRRF++ GE       V++VDDYGHHP+E+AAT+  AR  +P +RLV+++QPH
Sbjct: 320 LDEFQGIGRRFQQLGEFTTTAGEVMLVDDYGHHPSEVAATIKAARSGWPDKRLVMIYQPH 379

Query: 359 RFSRTQALFGEFCKVFDGVDKLLLTEIYPASEKPIPGVSGQSLAQGIRQVSKTDVTYHQD 418
           R+SRT+ L+ +F +V   VD LLL ++Y A E P+PG   ++L + IRQ  + D  +  +
Sbjct: 380 RYSRTRDLYDDFVEVLAQVDCLLLLDVYSAGEAPVPGADSRALCRSIRQRGQLDPIFVAE 439

Query: 419 FDSVLAALPEVLQPGDLLLTLGAGNV 444
            + +   LP VLQ GDLLLT GAGN+
Sbjct: 440 PEQLQTILPGVLQGGDLLLTQGAGNI 465