Pairwise Alignments

Query, 230 a.a., two component transcriptional regulator, winged helix family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 248 a.a., transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  181 bits (458), Expect = 1e-50
 Identities = 109/231 (47%), Positives = 137/231 (59%), Gaps = 10/231 (4%)

Query: 2   TKERILVVEDDEDILQLLTFTFESAGFEVRTATTGREGLEIALRQKPALVLLDLMLPGMS 61
           T   ILVV+DD DI  LL    +S G    TAT G E   +    +  L++LDL LPG  
Sbjct: 6   TNTHILVVDDDRDIRTLLAEYLDSNGLRTLTATNGSEMRRVLEESRVDLIVLDLTLPGED 65

Query: 62  GLDVCRELKRMPETEDVPVIMLTARGEEVDRIVGLELGADDYVVKPFSPRELVLRIRAVL 121
           GL +CR L+    T  VPVIMLTARGE +DRI+GLE+GADDY+ KPF PREL  RIR+VL
Sbjct: 66  GLTLCRNLRA---TSSVPVIMLTARGEPLDRILGLEMGADDYLAKPFEPRELFARIRSVL 122

Query: 122 KRAQGVAEN---PQRSQWQIDGLALDLDA-HRVEVDGEEAALTATEFRLLAELVRNRGRV 177
           +R Q +  N   P  +  +  G  LDL A H V  DG   AL+  EFRLL   + +  RV
Sbjct: 123 RRTQALPPNMAQPDVAAMRFAGWTLDLTARHLVNRDGVVVALSGAEFRLLKVFLDHPNRV 182

Query: 178 RTRDQLLNTVWGYEFEGYARTVDTHVRRLRQKIGGYA---AMIETIRGVGY 225
             RDQLL    G E + + R+VD  + RLRQK+G  A    +I+T+R  GY
Sbjct: 183 LNRDQLLELTQGRESDPFDRSVDIQISRLRQKLGDDARTPTIIKTVRNEGY 233