Pairwise Alignments

Query, 155 a.a., protein of unknown function DUF163 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 155 a.a., 50S rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

 Score = 80.9 bits (198), Expect = 9e-21
 Identities = 56/159 (35%), Positives = 84/159 (52%), Gaps = 15/159 (9%)

Query: 4   LRLLAVGKLKTPFWQQAAAH-YLERLRHTWRVTETLVRDGDAALPPAKRNAD-------E 55
           LRL+AVG  + P W +   H Y +RL      +E  +   +  L    +NAD       E
Sbjct: 3   LRLIAVGS-RMPKWVEEGWHEYAKRLP-----SELALELVEIPLNTRGKNADVARFIRQE 56

Query: 56  GARLLAALGPADIVVCMDERGKAYTSREFAALLDRLTENATAVPCFVIGGAYGLDDAVLK 115
           G  +LA +GP + +V ++  GK +++ + A  LDR   ++  V  F++GG  GL   V  
Sbjct: 57  GEAMLAKVGPNERIVTLEVHGKPWSTEQLAVELDRWRLDSRTVN-FMVGGPEGLAPEVCA 115

Query: 116 RATLRVCLGPMTFPHEMARVVLLEQLYRADCILRRSPYH 154
           RA  R  L P+T PH + R+++ EQLYRA  +L   PYH
Sbjct: 116 RADQRWSLSPLTLPHPLVRILIGEQLYRAWTVLSGHPYH 154