Pairwise Alignments

Query, 155 a.a., protein of unknown function DUF163 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 156 a.a., rRNA large subunit methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score = 66.6 bits (161), Expect = 2e-16
 Identities = 56/160 (35%), Positives = 77/160 (48%), Gaps = 17/160 (10%)

Query: 4   LRLLAVGKLKTPFWQQAAAHYLERLRHTWRVTETLVRDGDAALPPAKR--NAD------- 54
           L+L+AVG  K P W        +R R    +   LV      +P  KR  NAD       
Sbjct: 3   LQLIAVGT-KMPDWVTRGFEEYQR-RFPRDMALELVE-----IPAGKRGKNADIARILQK 55

Query: 55  EGARLLAALGPADIVVCMDERGKAYTSREFAALLDRLTENATAVPCFVIGGAYGLDDAVL 114
           EG ++LAA+   + +V +D  GK +T+ E A+ L +   +   V   +IGG  GL  A  
Sbjct: 56  EGEQMLAAIPKGNHIVTLDLPGKNWTTPELASALSKWQLDGRDVS-LLIGGPEGLAPACK 114

Query: 115 KRATLRVCLGPMTFPHEMARVVLLEQLYRADCILRRSPYH 154
           + A    CL  +T PH + RVV+ E LYRA  I    PYH
Sbjct: 115 QAAAQSWCLSALTLPHPLVRVVVAESLYRAWSINNNHPYH 154