Pairwise Alignments

Query, 155 a.a., protein of unknown function DUF163 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Rahnella sp. WP5

 Score = 66.6 bits (161), Expect = 2e-16
 Identities = 54/159 (33%), Positives = 75/159 (47%), Gaps = 15/159 (9%)

Query: 4   LRLLAVGKLKTPFWQQAAAH-YLERLRHTWRVTETLVRDGDAALPPAKRNAD-------E 55
           L+L+AVG  K P W Q   + YL R         T V  G        +NAD       E
Sbjct: 3   LQLVAVGT-KMPDWVQTGFNDYLHRFPKDMPFELTEVPAGKRG-----KNADIKRILEKE 56

Query: 56  GARLLAALGPADIVVCMDERGKAYTSREFAALLDRLTENATAVPCFVIGGAYGLDDAVLK 115
           G ++LAA+G  + +V +D  G  + + + A  L+R  ++   V   +IGG  GL  A   
Sbjct: 57  GEQMLAAVGKGNRIVTLDIPGTPWETPQLAQQLERWKQDGRNVS-LLIGGPEGLAPACKA 115

Query: 116 RATLRVCLGPMTFPHEMARVVLLEQLYRADCILRRSPYH 154
            A     L P+T PH + RV++ E LYRA  I    PYH
Sbjct: 116 AAEQSWSLSPLTLPHPLVRVLVAESLYRAWSITTNHPYH 154