Pairwise Alignments

Query, 155 a.a., protein of unknown function DUF163 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Pantoea sp. MT58

 Score = 59.7 bits (143), Expect = 2e-14
 Identities = 52/159 (32%), Positives = 71/159 (44%), Gaps = 15/159 (9%)

Query: 4   LRLLAVGKLKTPFWQQAA-AHYLERLRHTWRVTETLVRDGDAALPPAKRNAD-------E 55
           L+L+AVG  K P W Q     YL R           V  G        +NAD       E
Sbjct: 3   LQLVAVGT-KMPDWVQTGFMEYLRRFPKDMPFELIEVTAGKRG-----KNADIKRILEKE 56

Query: 56  GARLLAALGPADIVVCMDERGKAYTSREFAALLDRLTENATAVPCFVIGGAYGLDDAVLK 115
           G  +LAA+G  + +V +D  G+ + + + A  L+R   +   V   +IGG  GL  A   
Sbjct: 57  GEAMLAAVGKGNRIVTLDIPGQPWETPQLAQQLERWKLDGRDVS-LLIGGPEGLAPACKA 115

Query: 116 RATLRVCLGPMTFPHEMARVVLLEQLYRADCILRRSPYH 154
            A     L  +T PH + RV++ E LYRA  I    PYH
Sbjct: 116 AAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYH 154