Pairwise Alignments

Query, 155 a.a., protein of unknown function DUF163 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 155 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Klebsiella michiganensis M5al

 Score = 58.9 bits (141), Expect = 3e-14
 Identities = 57/161 (35%), Positives = 74/161 (45%), Gaps = 20/161 (12%)

Query: 4   LRLLAVGKLKTPFWQQAA-AHYLERLRHTWRVTETLVRDGDAALPPAKR--NAD------ 54
           L L+AVG  K P W Q   + YL R      +   LV      +P  KR  NAD      
Sbjct: 3   LHLVAVGT-KMPDWVQTGFSEYLRRFPKD--MPFELVE-----IPAGKRGKNADIKRILE 54

Query: 55  -EGARLLAALGPADIVVCMDERGKAYTSREFAALLDRLTENATAVPCFVIGGAYGLDDAV 113
            EG  +LAA G   IV  +D  GK + + + A  L+R  ++   V   +IGG  GL  A 
Sbjct: 55  KEGEMMLAAAGKNRIVT-LDIPGKPWDTPQLARELERWKQDGRDVS-LLIGGPEGLSPAC 112

Query: 114 LKRATLRVCLGPMTFPHEMARVVLLEQLYRADCILRRSPYH 154
              A     L  +T PH + RV++ E LYRA  I    PYH
Sbjct: 113 KAAAEQSWSLSTLTLPHPLVRVLVAESLYRAWSITTNHPYH 153