Pairwise Alignments

Query, 286 a.a., protein of unknown function DUF6 transmembrane (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 364 a.a., permease of the drug/metabolite transporter from Synechococcus elongatus PCC 7942

 Score = 63.9 bits (154), Expect = 5e-15
 Identities = 68/262 (25%), Positives = 106/262 (40%), Gaps = 32/262 (12%)

Query: 52  RDWGVLFLQAAAGSLLFNVLLLAGVARLDAAAAGVVTSTTPAVMALASLVLLRERPGPRT 111
           R W  + L       LF   L  G+ R  A    V+  + P ++AL +  L  ER G   
Sbjct: 78  RAWAWIGLFGLVDGTLFQGFLAEGLTRTGAGIGSVMIDSQPLIVALLAYWLFGERIGLWG 137

Query: 112 LAGIACCVAGVLVLRLAPVPGAAGGDAALS-----------------------LTASGAD 148
             G+A  + G+ +L L      A GD  L                        L+A   +
Sbjct: 138 WLGLAIGIVGISLLGLPETWLLALGDRLLQGLHIPVQLVGPAIAELWPTDQSWLSALFNN 197

Query: 149 GVGLLLVLGAVCCETLFLLLGRTLRTPVSPLAASTACTLFGAVQFLPLALP----QAHRV 204
           G  L+L+  A     +  +L R +     P+AA+    + GA+   PL L     ++ + 
Sbjct: 198 GRWLMLL--AALSMAVGTILSRYVSRWADPIAATGWHMIVGAI---PLVLGSWSLESQQW 252

Query: 205 AELDVTGWLLVGYYGAVITVAAYIFWFRGVARVSAGTAGAFTSVLPVSALAFSALLLGEP 264
            +L ++ WL + Y     +  AY  +F   A  S  +  A T + PV AL F  L LGE 
Sbjct: 253 QQLGLSDWLALSYATLFGSAIAYGLFFYFAASGSLTSLSALTFLTPVFALLFGNLFLGEK 312

Query: 265 VGWAHLAGVACVLCGIWCVTRR 286
           +G     GV+  L  I  +++R
Sbjct: 313 LGMIQWVGVSLSLVSILLISQR 334