Pairwise Alignments

Query, 1030 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 695 a.a., putative CheA signal transduction histidine kinase (RefSeq) from Shewanella amazonensis SB2B

 Score =  335 bits (858), Expect = 9e-96
 Identities = 184/447 (41%), Positives = 285/447 (63%), Gaps = 13/447 (2%)

Query: 576  APAPASAVAAPAASAKPAAPVAPARPAAPTAPSAPAAPAGGQGAAAAAQAQQAGAAKA-- 633
            A AP++  +    S  P + V P   A       P   A     A A+Q Q A AAK+  
Sbjct: 239  AAAPSADTSTEMLSPSPQSEVDPPVAAPDVIALTPQVQALATDKAVASQKQSAAAAKSGE 298

Query: 634  SSTIRVDHEKLDHLMNLIGELIINRNRYTMLARRLEDDTNVVIAEVAQDLSETTYAMARI 693
            SS+IRV  EK+D L+N++GEL+I +     + ++ E +   ++      L +    +A  
Sbjct: 299  SSSIRVSTEKIDMLINMVGELVITQAMLGQIGQQDEINQESLLL-----LQQGLEQLASH 353

Query: 694  SDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLILEGEETELDKSVVEVIGDP 753
            + DLQ+++M++RM+P+S  F+RFPRLVRD+ ++ GK+V+LIL+GE+TELDK+V+E I DP
Sbjct: 354  TRDLQESVMQIRMLPISFAFNRFPRLVRDIGQQLGKKVELILKGEDTELDKTVLEKIVDP 413

Query: 754  LVHLIRNAVDHGVESEDERVAKGKKAKGKVTLRAYHKGNSVAIEIEDDGKGIDPEKMREV 813
            +VHL+RN++DHG+ES + R+A+GK   G + L AYH+G  + IEI DDG G++  K+ E 
Sbjct: 414  MVHLVRNSLDHGLESPEARLAQGKSETGTIMLNAYHQGGCIIIEIADDGAGLNTHKILEK 473

Query: 814  AVRKGIITPDEAKAMDDREAMELIFAPGFSSAEKITDISGRGVGMDVVRTNIKNLKGSVS 873
            A +KG++  +E   + +    +LIF PGFS+A+ ++D+SGRGVGMDVV+ NI  L GS+ 
Sbjct: 474  ARQKGLVGAEE--ELSEEAIHQLIFRPGFSTADAVSDLSGRGVGMDVVKRNIHELNGSIE 531

Query: 874  IHSEIGKGTRFTLSLPLTLAIIDALMVNVAGEMYAIPLDAVSETTKIEARRLTDVK-GRK 932
            + SE GKG+RFT+ LPLTLAI+D  ++ +   +Y +PL ++ E+ ++   R+  +  G +
Sbjct: 532  LKSEAGKGSRFTIRLPLTLAILDGQLIRIGKHIYVVPLVSIYESLQVPTNRINRLSDGHE 591

Query: 933  AVTLRGEVLGIASLSELLGLPKGDKQ--DVLSVVVIHDNDRRLGLVVDRLLERQEIVIKP 990
             + LR E L +  +          ++  D L +VV H+N+ + GL+VD LL +Q++VIK 
Sbjct: 592  LIRLRDEYLPVIKMYREFNHDADAREIKDGLVMVVDHNNE-KAGLLVDELLAQQQVVIKS 650

Query: 991  LGAYLGDLKGISGATIMGDGSVILILD 1017
            L      + GISGATI+GDG+V LI+D
Sbjct: 651  LEENYTRIPGISGATILGDGTVALIID 677



 Score = 60.1 bits (144), Expect = 5e-13
 Identities = 32/94 (34%), Positives = 51/94 (54%)

Query: 14  FIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLGLNRINGLAHRAEN 73
           F  E+ E L  +E  LL+L+ A  +   +N IFR  HS+KG S   G  ++    H  E 
Sbjct: 12  FFEESIEGLAIMESELLKLDVAAPDPETINTIFRAAHSIKGGSATFGFMQVANYTHLLET 71

Query: 74  IMDELRKGDMTVTSEIMDVILSATDALRQMVDNL 107
           ++DE+R G   +  + +D++L + D LR M + L
Sbjct: 72  LLDEIRDGRRQMQPDHVDMLLLSVDLLRGMFEAL 105



 Score = 58.9 bits (141), Expect = 1e-12
 Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 1/91 (1%)

Query: 222 FIDEAREMAENLSSGLLELERNPTEQGELVNDLFRFFHNLKGNSGIIGFAELNSLTHEAE 281
           F +E+ E    + S LL+L+    +  E +N +FR  H++KG S   GF ++ + TH  E
Sbjct: 12  FFEESIEGLAIMESELLKLDVAAPDP-ETINTIFRAAHSIKGGSATFGFMQVANYTHLLE 70

Query: 282 TLLNNVRRGEMTGSHELVDLLLLVVDLLEAL 312
           TLL+ +R G      + VD+LLL VDLL  +
Sbjct: 71  TLLDEIRDGRRQMQPDHVDMLLLSVDLLRGM 101