Pairwise Alignments
Query, 1030 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F
Subject, 759 a.a., putative CheA signal transduction histidine kinase (RefSeq) from Shewanella amazonensis SB2B
Score = 394 bits (1013), Expect = e-113
Identities = 279/842 (33%), Positives = 411/842 (48%), Gaps = 147/842 (17%)
Query: 219 LKDFIDEAREMAENLSSGLLELERNPTEQGELVNDLFRFFHNLKGNSGIIGFAELNSLTH 278
L+DF+ EA E+ E L L+ LE NP E +L+N +FR FH +KG +G +G A + + H
Sbjct: 10 LQDFLIEAGEILELLQEQLVALENNP-EDTDLLNAIFRGFHTVKGGAGFLGLAPMVDVCH 68
Query: 279 EAETLLNNVRRGEMTGSHELVDLLLLVVDLLEALVTRIDPVSGNVTPFDISVILECLRKA 338
E+E + +R G+ + EL+D++L VD + + + +G + +L+ L+
Sbjct: 69 ESENTFDLLRTGKRHVTAELMDIILQAVDAINTMFAQTQ--AGQAQEPASAELLDKLKLL 126
Query: 339 VAGGDITLPEGLGGRRSGGSVAE----------------------APAPEAGAPGTDDDA 376
+G + GG S S +E A P AP DD
Sbjct: 127 SSGAPL---PSEGGEASSSSSSEPTINVDNEIPGVELFGDLEEPAAAEPVTQAPAMTDDF 183
Query: 377 DAPSPPVAPGYDPDDVALF---INTVRQQMDNVGVALKTLAVDGTQR----------EYV 423
SP D + A F ++ + GV + A + E
Sbjct: 184 LFDSPASDSSIDEINEAEFEALLDALHGSGKGPGVTGTSGAAPSADKAAAKAAPAGDEIT 243
Query: 424 DALYRCLVTIQNSSGYMGLDDIRVYA---ERTAGLVDQARFSGMDFSLMVDLMEQETSII 480
D + L+ + SG +V A + A VD + +F ++D + + +
Sbjct: 244 DDEFEALLDELHGSGKFKATTDKVVAKVEDSPADHVDTDEITDDEFEKLLDELHGKGTGP 303
Query: 481 GDMLEKQIARISMPAPAQAPEAAPAAPEAKAAPAPAAEAKAVAAPPAAKTDVTTDARAAA 540
G + A AAPA + K+A APA K VA P
Sbjct: 304 G-------------VVSAAKPAAPATSQPKSAAAPAESPKPVAKP--------------- 335
Query: 541 SVDAEDEDAEDDDAAVVTISSVTGTPAPAAAVKPAAPAPASAVAAPAASAKPAAPVAPAR 600
+P A KP A+ K APVA A
Sbjct: 336 -------------------------SSPVEAPKPV-----------VAAEKSPAPVAKAA 359
Query: 601 PAAPTAPSAPAAPAGGQGAAAAAQAQQAGAAKASSTIRVDHEKLDHLMNLIGELIINRNR 660
PAA A + +T+RVD +LD +MN++GEL++ RNR
Sbjct: 360 PAA-----------------------GASVPQGETTVRVDTARLDQIMNMVGELVLVRNR 396
Query: 661 YTMLARRLEDDTNVVIAEVAQDLSETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLV 720
L ED +++S+ + ++ DLQ +MK RM P+ VF RFPR+V
Sbjct: 397 LVSLGVTRED----------EEMSKALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVV 446
Query: 721 RDLSRKSGKEVDLILEGEETELDKSVVEVIGDPLVHLIRNAVDHGVESEDERVAKGKKAK 780
RDL+R KE+DL+L GEET+LDK++VE + DPLVHL+RN+VDHG+E +RVA GK
Sbjct: 447 RDLARSLNKEIDLVLVGEETDLDKNLVEALADPLVHLVRNSVDHGIEMPADRVASGKPKT 506
Query: 781 GKVTLRAYHKGNSVAIEIEDDGKGIDPEKMREVAVRKGIITPDEAKAMDDREAMELIFAP 840
G +TL A +G+ + ++IEDDG G+DPEK++ +AV++G++ D A M D EA LIFAP
Sbjct: 507 GTITLSASQEGDHILLKIEDDGAGMDPEKLKAIAVKRGVLDEDAAARMSDHEAYNLIFAP 566
Query: 841 GFSSAEKITDISGRGVGMDVVRTNIKNLKGSVSIHSEIGKGTRFTLSLPLTLAIIDALMV 900
GFS+ +I+DISGRGVGMDVV+T I L G+V I S GKGT + +PLTLAI+ LMV
Sbjct: 567 GFSTKTEISDISGRGVGMDVVKTRITQLNGTVHIDSVKGKGTILEIKVPLTLAIMPTLMV 626
Query: 901 NVAGEMYAIPLDAVSETTKIEARRLTDVKGRKAVTLRGEVLGIASLSELLGLPK-----G 955
VA +++A+PL +V+E ++ + V G+ V R + + + L + L K G
Sbjct: 627 EVAKQVFALPLSSVNEIFHLDLTKTNIVDGQLTVIFRDKAVPLFYLEQWLSRSKTKFKHG 686
Query: 956 DKQDVLSVVVIHDNDRRLGLVVDRLLERQEIVIKPLGAYLGDLKGISGATIMGDGSVILI 1015
DK+ VV++ ++G VVD L+ ++E+VIKPLGA L G++GATI DG + LI
Sbjct: 687 DKKHG-HVVIVQLGTMQIGFVVDALIGQEEVVIKPLGALLHGTPGMAGATITSDGGIALI 745
Query: 1016 LD 1017
LD
Sbjct: 746 LD 747
Score = 96.7 bits (239), Expect = 6e-24
Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 6/178 (3%)
Query: 6 MDPEIFADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLGLNRIN 65
+D EI DF++EA E LE ++ L+ LE P++ LLN IFR H++KG +GFLGL +
Sbjct: 5 VDEEILQDFLIEAGEILELLQEQLVALENNPEDTDLLNAIFRGFHTVKGGAGFLGLAPMV 64
Query: 66 GLAHRAENIMDELRKGDMTVTSEIMDVILSATDALRQMVDNLDTTGGEGDVETESIIATI 125
+ H +EN D LR G VT+E+MD+IL A DA+ M T G+ + +
Sbjct: 65 DVCHESENTFDLLRTGKRHVTAELMDIILQAVDAINTMF--AQTQAGQAQEPASAELLDK 122
Query: 126 DAIMAGGAP-PAAPRPAPAAPAPAPAPEPAPAAEPVVAPAPAPAPAPAAEPEPVAAAP 182
+++ GAP P+ A ++ + P V PA A EPV AP
Sbjct: 123 LKLLSSGAPLPSEGGEASSSSSSEPTINVDNEIPGVELFGDLEEPAAA---EPVTQAP 177