Pairwise Alignments
Query, 1030 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F
Subject, 708 a.a., Chemotaxis protein histidine kinase and related kinases from Sphingomonas koreensis DSMZ 15582
Score = 330 bits (847), Expect = 2e-94
Identities = 241/725 (33%), Positives = 366/725 (50%), Gaps = 104/725 (14%)
Query: 383 VAPGYDPDDV-ALFINTVRQQMDNVGVALKTLAVDGTQREYVDALYRCLVTIQNSSGYMG 441
V+ G + D++ A+F + + L +A T + + ++R + +I+ SG G
Sbjct: 1 VSGGDELDEIQAIFFEECVEGLATAEAGLSAMASGDTSADVIAGVFRAVHSIKGGSGAFG 60
Query: 442 LDDIRVYAERTAGLVDQARFSGMDFSLMVD-LMEQETSIIGDMLEKQIARISMPAPAQ-- 498
++ ++ R ++D+ R + S V +M I+ D + +P A
Sbjct: 61 HGALQAFSHRFENVLDEVRAGHIVASADVTRIMLNAFDILSDHVAAAQGARDLPDDAAML 120
Query: 499 -------APEAAPAAPEAKAAPAPAAEAKAVAAPPAAKT----------DVTTD------ 535
A + APAA A +APAPAAE P VT D
Sbjct: 121 EQLEAVLASKGAPAAAAA-SAPAPAAEEDDFGFTPVMAVVEEFDPFGFEPVTVDLEDLGA 179
Query: 536 ------------ARAAASVDAED----EDAEDDDAAVVTISS---------------VTG 564
+RAA + E + E+ AV + + +
Sbjct: 180 PEPLGWTVRFGPSRAAMANGGEPMLVIRELEEMGGAVAHVDTSRLPGLRDLDPEDGYLVW 239
Query: 565 TPAPAAAVKPAAPAPASAVAAP----------AASAKPAAPVAPARPAAPTAPSAPA--- 611
T + A V+ A AP A+A+PAA P P PA
Sbjct: 240 TVSLPATVEEQAIRDCFDFVAPDSLIEIERDEVAAAEPAAVELPVVTPVKAEPERPALTL 299
Query: 612 ----APAGGQGAAAAAQAQQAGAAKASSTIRVDHEKLDHLMNLIGELIINRNRYTMLARR 667
AP+GG A++ A + TIRVD KLD L+NL+GEL+I R ++L+ R
Sbjct: 300 VADNAPSGG--------AEKPKADAPAQTIRVDLGKLDQLLNLVGELVI---RGSILSDR 348
Query: 668 LE--DDTNVVIAEVAQDLSETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSR 725
L D V + E ++R++ +QD +M +R P+ FSR PR++RDL
Sbjct: 349 LSPADQERVELPE-----------LSRLTRQIQDNVMSLRAQPIRQAFSRVPRMLRDLMA 397
Query: 726 KSGKEVDLILEGEETELDKSVVEVIGDPLVHLIRNAVDHGVESEDERVAKGKKAKGKVTL 785
++GK+V L GE TE+DK V+E IGDPL H+IRNAVDHG+ES +ER+A GK A G + L
Sbjct: 398 ETGKQVTLETTGEMTEVDKGVIEKIGDPLTHMIRNAVDHGIESAEERIAAGKPAGGTIRL 457
Query: 786 RAYHKGNSVAIEIEDDGKGIDPEKMREVAVRKGIITPDEAKAMDDREAMELIFAPGFSSA 845
A KG + + + DDG+GI+ E++R A+ +GII D + D E LI APGFS+A
Sbjct: 458 SAEQKGARIVVRVADDGRGINRERVRAKAIERGIIAAD--AQLSDEEIDGLICAPGFSTA 515
Query: 846 EKITDISGRGVGMDVVRTNIKNLKGSVSIHSEIGKGTRFTLSLPLTLAIIDALMVNVAGE 905
E I++ISGRGVGMDVVR+N++ L G + IHS G+GT FT++LPLTLAI+D ++V + +
Sbjct: 516 ESISNISGRGVGMDVVRSNVEALGGRLEIHSVPGQGTTFTMALPLTLAILDGMIVRLGKQ 575
Query: 906 MYAIPLDAVSETTKIEARRLTDVKGR-KAVTLRGEVLGIASLSELLGLPKG-DKQDVLSV 963
+ +PL V ET + ++ + + LRG L + + ++ GLP G D ++ L +
Sbjct: 576 RFVLPLGNVVETVQPAPGQVRATSPHSEVIELRGNYLPVRRIGDMFGLPCGSDPEECLVI 635
Query: 964 VVIHDNDRRLGLVVDRLLERQEIVIKPLGAYLGDLKGISGATIMGDGSVILILDPHEVYM 1023
+V + +GL+VD + R+E+VIK L L ++G+ GAT++GDGS+ LILD + +
Sbjct: 636 IVESEVAGHVGLMVDTIDNRREVVIKSLEDNLHPIRGLGGATVLGDGSIALILDIDALVV 695
Query: 1024 MATSK 1028
A SK
Sbjct: 696 PAGSK 700
Score = 77.4 bits (189), Expect = 3e-18
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 9 EIFADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLGLNRINGLA 68
EI A F E E L T E L + + ++ +FR +HS+KG SG G + +
Sbjct: 9 EIQAIFFEECVEGLATAEAGLSAMASGDTSADVIAGVFRAVHSIKGGSGAFGHGALQAFS 68
Query: 69 HRAENIMDELRKGDMTVTSEIMDVILSATDALRQMVDNLDTTGGEGDV-ETESIIATIDA 127
HR EN++DE+R G + ++++ ++L+A D L D++ G D+ + +++ ++A
Sbjct: 69 HRFENVLDEVRAGHIVASADVTRIMLNAFDILS---DHVAAAQGARDLPDDAAMLEQLEA 125
Query: 128 IMAGGAPPAAPRPAPAAPAPAPAPE 152
++A PA A AA APAPA E
Sbjct: 126 VLASKGAPA----AAAASAPAPAAE 146
Score = 52.0 bits (123), Expect = 1e-10
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 17/168 (10%)
Query: 222 FIDEAREMAENLSSGLLELERNPTEQGELVNDLFRFFHNLKGNSGIIGFAELNSLTHEAE 281
F +E E +GL + T +++ +FR H++KG SG G L + +H E
Sbjct: 14 FFEECVEGLATAEAGLSAMASGDTS-ADVIAGVFRAVHSIKGGSGAFGHGALQAFSHRFE 72
Query: 282 TLLNNVRRGEMTGSHELVDLLLLVVDLLEALVTRIDPVSGNVTPFDISVILECLRKAVAG 341
+L+ VR G + S ++ ++L D+L + G D + +LE L +A
Sbjct: 73 NVLDEVRAGHIVASADVTRIMLNAFDILS---DHVAAAQGARDLPDDAAMLEQLEAVLAS 129
Query: 342 GDITLPEGLGGRRSGGSVAEAPAPEAGAPGTDDDADAPSPPVAPGYDP 389
G A A + A A DD P V +DP
Sbjct: 130 -------------KGAPAAAAASAPAPAAEEDDFGFTPVMAVVEEFDP 164