Pairwise Alignments
Query, 1030 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F
Subject, 659 a.a., Chemotaxis protein histidine kinase and related kinases from Sphingomonas koreensis DSMZ 15582
Score = 341 bits (874), Expect = 1e-97
Identities = 228/658 (34%), Positives = 349/658 (53%), Gaps = 52/658 (7%)
Query: 390 DDVALFINTVRQQMDNVGVALKTLAVDGTQREYVDALYRCLVTIQNSSGYMGLDDIRVYA 449
D +A F +D + L L RE VD ++R L T++ S G D + +
Sbjct: 5 DPIAAFRVEAGDLLDQIEHGLLDLTGRLDDRELVDEVFRGLHTLKGSGAMFGFDALATFT 64
Query: 450 ERTAGLVDQARF----SGMDFSLMVDLMEQETSIIGDMLEKQIARISMPAPAQAP-EAAP 504
D+ R + + ++ ++ D + Q ++ + QA +AA
Sbjct: 65 HHCETAFDRVRKGLAPATQELVAVILSARDHMRLLIDGDQDQATGDAILSRLQAAIDAAG 124
Query: 505 AAPEAKAAPAPAAEAKAVAAPPAAKTDVTTDARAAASVDAEDEDA-----EDDDAAVVTI 559
P++ AAP E A P +K+ R A A + E D +
Sbjct: 125 GVPDSIAAPI---EQAAAGDGPTSKSGWRLRFRLPADAMANGTNPLMLLDELRDLGDCAV 181
Query: 560 SSVTGTPAPAAAVKPA-----------APAPASAVAAP--------AASAKPAAPVAPAR 600
++T P A + PA P SA+ S +P
Sbjct: 182 RALTDRIPPLADLAPAENHVGWEVELRGDVPMSAIEDVFIFVMDDMELSCEPLDVQTDEA 241
Query: 601 PAAPTAPSAPAAPAGGQGAAAAAQAQQAGAAKASSTIRVDHEKLDHLMNLIGELIINRNR 660
PA AP A A AG A A A AAKA ++RV E+LD LM+ +GEL+I ++R
Sbjct: 242 PAGTPAPPAATAEAGSPSARATA------AAKADESVRVPAERLDELMDRVGELVIAQSR 295
Query: 661 YTMLARRLEDDTNVVIAEVAQDLSETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLV 720
+ LA+ D +V+ V++++ R++ +L+DT+M +RMVPV+S+F+RF RL+
Sbjct: 296 LSQLAQGSGHD--MVLRSVSEEIE-------RLAGELRDTMMVLRMVPVASLFNRFRRLI 346
Query: 721 RDLSRKSGKEVDLILEGEETELDKSVVEVIGDPLVHLIRNAVDHGVESEDERVAKGKKAK 780
DLSR++GK ++L+ EGE TE+DK+V+E + DP+VHLIRNA DHG+E+ D+R A GK +
Sbjct: 347 HDLSRETGKSIELLTEGEATEVDKTVIERLADPMVHLIRNACDHGLETPDQRAAAGKDST 406
Query: 781 GKVTLRAYHKGNSVAIEIEDDGKGIDPEKMREVAVRKGIITPDEAKAMDDREAMELIFAP 840
G V L A+ G V I I+DDG+GID +++R A +G+I P + A D++ +++IF P
Sbjct: 407 GTVRLSAHQAGGEVVITIQDDGRGIDRDRVRAKAEAQGLIQPGQLLA--DQDLLQMIFHP 464
Query: 841 GFSSAEKITDISGRGVGMDVVRTNIKNLKGSVSIHSEIGKGTRFTLSLPLTLAIIDALMV 900
GFS+A ++T++SGRGVGMDVV+ I++L+G++ + S GKG+ TL +PLTLAIID L+V
Sbjct: 465 GFSTAAQVTNLSGRGVGMDVVKRTIESLRGAIDVASTPGKGSTITLRIPLTLAIIDGLLV 524
Query: 901 NVAGEMYAIPLDAVSETTKIEARRLTDVKGRKAVTLRGEVLGIASLSELLGLPKGDKQDV 960
V Y IPL AV E ++ +GR +TLR ++ L E+ G + D
Sbjct: 525 RVGTGRYVIPLAAVEECLELPLEEDLRTRGRSFITLRDSLVPFLRLREMFAC--GTRPDA 582
Query: 961 L-SVVVIHDNDRRLGLVVDRLLERQEIVIKPLGAYLGDLKGISGATIMGDGSVILILD 1017
+VVI R+GLVVD+++ + VIK + A ++ +GATI+GDG + LILD
Sbjct: 583 FQKIVVIATGTERVGLVVDQIIGSHQTVIKSMSALHHNVTTFAGATILGDGGIALILD 640
Score = 82.4 bits (202), Expect = 9e-20
Identities = 51/135 (37%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 12 ADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLGLNRINGLAHRA 71
A F VEA + L+ IE LL+L D+ L++E+FR +H+LKG+ G + + H
Sbjct: 8 AAFRVEAGDLLDQIEHGLLDLTGRLDDRELVDEVFRGLHTLKGSGAMFGFDALATFTHHC 67
Query: 72 ENIMDELRKGDMTVTSEIMDVILSATDALRQMVDNLDTTGGEGDVETESIIATIDAIMAG 131
E D +RKG T E++ VILSA D +R ++D D GD + A IDA AG
Sbjct: 68 ETAFDRVRKGLAPATQELVAVILSARDHMRLLIDG-DQDQATGDAILSRLQAAIDA--AG 124
Query: 132 GAPPAAPRPAPAAPA 146
G P + P A A
Sbjct: 125 GVPDSIAAPIEQAAA 139
Score = 62.0 bits (149), Expect = 1e-13
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 215 GEGHLKDFIDEAREMAENLSSGLLELERNPTEQGELVNDLFRFFHNLKGNSGIIGFAELN 274
G+ + F EA ++ + + GLL+L ++ ELV+++FR H LKG+ + GF L
Sbjct: 3 GQDPIAAFRVEAGDLLDQIEHGLLDLTGRLDDR-ELVDEVFRGLHTLKGSGAMFGFDALA 61
Query: 275 SLTHEAETLLNNVRRGEMTGSHELVDLLLLVVDLLEALVTRIDPVSGNVTPFDISVILEC 334
+ TH ET + VR+G + ELV ++L D + L + G+ IL
Sbjct: 62 TFTHHCETAFDRVRKGLAPATQELVAVILSARDHMRLL------IDGDQDQATGDAILSR 115
Query: 335 LRKAV--AGGDITLPEGLGGRRSGGSVAEAPAPEAG 368
L+ A+ AGG +P+ + + + P ++G
Sbjct: 116 LQAAIDAAGG---VPDSIAAPIEQAAAGDGPTSKSG 148