Pairwise Alignments

Query, 1030 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1089 a.a., chemotaxis protein CheA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 1324 bits (3426), Expect = 0.0
 Identities = 750/1108 (67%), Positives = 829/1108 (74%), Gaps = 97/1108 (8%)

Query: 1    MSQDFMDPEIFADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLG 60
            M+Q++MDPEIFADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLG
Sbjct: 1    MTQEYMDPEIFADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLG 60

Query: 61   LNRINGLAHRAENIMDELRKGDMTVTSEIMDVILSATDALRQMVDNLDTTGGEGDVETES 120
            LNR+N LAHRAENI+DELRKG M VTSEIMDVIL+ TDALRQM+DNL+++G EGDV  ES
Sbjct: 61   LNRMNQLAHRAENILDELRKGAMVVTSEIMDVILAVTDALRQMIDNLESSGQEGDVAIES 120

Query: 121  IIATIDAIMAGGAPPAAPRPAPAAPAPAPAPEPAPAAEPVVAPAPAPAPAPAAEPEPVAA 180
            +I TIDAIMAGG    A   APAAPA   AP      EPV A  PA A   A EP+ + A
Sbjct: 121  LITTIDAIMAGGGAVPA---APAAPASPVAP-----VEPVAAVTPA-ADEAAVEPDGIVA 171

Query: 181  ------------------------------APRPQAEREVPADAGSAE------WIATLE 204
                                          A  P A  +   ++G  E      WIA L 
Sbjct: 172  TTVDEPSDGMSASDAAGGVGDNVQGPSVQDAAVPVASGDSGNESGMTEGESIAAWIAALP 231

Query: 205  PLESYALTAFGEGHLKDFIDEAREMAENLSSGLLELERNPTEQGELVNDLFRFFHNLKGN 264
              ESYALTAFGE HLKDFIDEAREM E L +GLLELER+P E+ + VNDLFRFFHNLKGN
Sbjct: 232  DTESYALTAFGEAHLKDFIDEAREMTEQLGTGLLELERHPDEKDDRVNDLFRFFHNLKGN 291

Query: 265  SGIIGFAELNSLTHEAETLLNNVRRGEMTGSHELVDLLLLVVDLLEALVTRIDPVSGNVT 324
            SGIIGF ELN LTHEAETLLNN+RRGEM  S ELVDLLL VVD+++ALV RI+  SG V 
Sbjct: 292  SGIIGFRELNGLTHEAETLLNNIRRGEMQSSAELVDLLLFVVDVIDALVNRIETASGMVH 351

Query: 325  PFDISVILECLRKAVAGGDITLPEGLGGRRSGGSVAEAPAPEAGAP------GTDDDADA 378
             FDIS +LE L++AVAGG+  LP G+ G       A  PA E+ A       G  D AD 
Sbjct: 352  GFDISEVLEPLQQAVAGGEARLPVGIVGMAK--QAASQPAAESTATTEGSMQGGADSADE 409

Query: 379  PSPPV------------APGYDPDDVALFINTVRQQMDNVGVALKTLAVDGTQREYVDAL 426
             + P             +  YD +D+ +F  TV QQMDN+ V L  LA D +Q+EYVDAL
Sbjct: 410  SAAPAKGEQQKAAACDPSATYDAEDLDVFKATVAQQMDNIRVGLDELARDASQKEYVDAL 469

Query: 427  YRCLVTIQNSSGYMGLDDIRVYAERTAGLVDQARFSGMDFSLMVDLMEQETSIIGDMLEK 486
            YR LVT+QNS  YMG +D+R+YAERTAGLVDQAR + +DF LMVDL+ QETSIIGDML K
Sbjct: 470  YRFLVTVQNSCAYMGAEDVRLYAERTAGLVDQARNADLDFGLMVDLLRQETSIIGDMLGK 529

Query: 487  QIARISM------------PAPAQAPEAAPAAPEAKAAPAPAAEAKAVAAP----PAAKT 530
            +IAR+               APA A    P++    +A AP + + A  AP    PA K 
Sbjct: 530  EIARMEDCLNGGDAESEQGEAPAAATVGTPSSAATTSASAPESGSVAQGAPSSEKPAQKP 589

Query: 531  DVTTDARAAASVDAEDEDAEDDDAAVVTISSVTGTPAPAAAVKPAAPAPASAVAAPAASA 590
            +    A A  S  +    A          S+  G  A AA+ KPAAPA +   A P A+A
Sbjct: 590  EPVPAAPAFQSAASSGAQA--------AASAPAGQAAAAASAKPAAPATSGTEAKPVAAA 641

Query: 591  KP------AAPVAPARPAA-PTAPSAPAAPAGGQGAAAAAQAQQAGAAKASSTIRVDHEK 643
                    A+  APA+  A P  P+APA  A    AAA A    AG +KASSTIRVDHEK
Sbjct: 642  TTPPKAAAASSAAPAKAVATPPRPAAPAPAAASAPAAAPAGGPPAGGSKASSTIRVDHEK 701

Query: 644  LDHLMNLIGELIINRNRYTMLARRLEDD-TNVVIAEVAQDLSETTYAMARISDDLQDTIM 702
            LDHLMNLIGELIINRNRY+MLAR LE+   +V +AEVAQ+LSETTYAMARISDDLQDTIM
Sbjct: 702  LDHLMNLIGELIINRNRYSMLARHLEEGGASVNVAEVAQNLSETTYAMARISDDLQDTIM 761

Query: 703  KVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLILEGEETELDKSVVEVIGDPLVHLIRNAV 762
            KVRMVPVSSVFSRFPRLVRDLSRKSGKEVDL+LEGEETELDKSVVEVIGDPLVHLIRN+V
Sbjct: 762  KVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLVLEGEETELDKSVVEVIGDPLVHLIRNSV 821

Query: 763  DHGVESEDERVAKGKKAKGKVTLRAYHKGNSVAIEIEDDGKGIDPEKMREVAVRKGIITP 822
            DHGVE E+ER+AKGKK KG VTLRA+HKGNSVAIEIEDDGKGIDPEKMREVAVRKGI+TP
Sbjct: 822  DHGVEPEEERIAKGKKPKGVVTLRAFHKGNSVAIEIEDDGKGIDPEKMREVAVRKGIVTP 881

Query: 823  DEAKAMDDREAMELIFAPGFSSAEKITDISGRGVGMDVVRTNIKNLKGSVSIHSEIGKGT 882
            +EAKAMDDREAMELIFAPGFSSAEKITDISGRGVGMDVVRTNIKNLKGSVSIHSE+GKGT
Sbjct: 882  EEAKAMDDREAMELIFAPGFSSAEKITDISGRGVGMDVVRTNIKNLKGSVSIHSEVGKGT 941

Query: 883  RFTLSLPLTLAIIDALMVNVAGEMYAIPLDAVSETTKIEARRLTDVKGRKAVTLRGEVLG 942
            RFTLSLPLTLAIIDALMVNVAG+MYAIPLDAVSETTKIEARRLTDVKGRKAVTLRGEVLG
Sbjct: 942  RFTLSLPLTLAIIDALMVNVAGQMYAIPLDAVSETTKIEARRLTDVKGRKAVTLRGEVLG 1001

Query: 943  IASLSELLGLPKGDKQDVLSVVVIHDNDRRLGLVVDRLLERQEIVIKPLGAYLGDLKGIS 1002
            I  LSELL LP+ D QDVLSVVVIHDNDRRLGLVVDRLLERQEIVIKPLGAYLGDLKGIS
Sbjct: 1002 IVDLSELLALPRSDAQDVLSVVVIHDNDRRLGLVVDRLLERQEIVIKPLGAYLGDLKGIS 1061

Query: 1003 GATIMGDGSVILILDPHEVYMMATSKAI 1030
            GATIMGDGSVILILDPHE+YMMATSKAI
Sbjct: 1062 GATIMGDGSVILILDPHEIYMMATSKAI 1089