Pairwise Alignments

Query, 1030 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 708 a.a., chemotaxis protein CheA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  324 bits (831), Expect = 1e-92
 Identities = 185/394 (46%), Positives = 255/394 (64%), Gaps = 18/394 (4%)

Query: 625  AQQAGAAKASSTIRVDHEKLDHLMNLIGELIINRNRYTMLARRLEDDTNVVIAEVAQDLS 684
            A++AG A AS  IRV   KLD+L++L+GEL+I +++   +A              A  + 
Sbjct: 319  AEKAGDAGAS--IRVSAAKLDYLVDLVGELVIVQSQIARMAHE----------HPAPGML 366

Query: 685  ETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLILEGEETELDK 744
                A+ R+SDDL+DT + VRM+P+ + FSRF RLVRDL+ + GK V+L+  G ETELDK
Sbjct: 367  SLVEALERLSDDLRDTTLGVRMLPIGTTFSRFRRLVRDLAGELGKSVELVTLGGETELDK 426

Query: 745  SVVEVIGDPLVHLIRNAVDHGVESEDERVAKGKKAKGKVTLRAYHKGNSVAIEIEDDGKG 804
            +V+E +GDPLVH +RN++DHGVES + R+A GK A G++TL A H G  V + I DDG G
Sbjct: 427  TVIERLGDPLVHCLRNSLDHGVESPERRLAAGKSATGRITLAAAHAGGEVLVTISDDGAG 486

Query: 805  IDPEKMREVAVRKGIITPDEAKAMDDREAMELIFAPGFSSAEKITDISGRGVGMDVVRTN 864
            ID E++ + A+RKGII P+    +  R+ +ELIFA GFS+AEK+T +SGRGVGMDVV+  
Sbjct: 487  IDAERIYQAALRKGIIAPE--VDLSTRQKLELIFAAGFSTAEKVTSVSGRGVGMDVVKRA 544

Query: 865  IKNLKGSVSIHSEIGKGTRFTLSLPLTLAIIDALMVNVAGEMYAIPLDAVSETTKIEARR 924
            I++L+G + + S  GKGT  T+ LPLTLAIID L V V  E Y IPL  V E    E   
Sbjct: 545  IESLRGRIELESTPGKGTVITIRLPLTLAIIDGLQVRVGDESYIIPLPHVEECA--EHNT 602

Query: 925  LTDVKGR-KAVTLRGEVLGIASLSELLGLPKGDKQDVLSVVVIHDNDRRLGLVVDRLLER 983
               V GR + + LRG+++    L ++  +P G    +  +VV++    R GLVVD ++  
Sbjct: 603  PDHVDGRQRIINLRGDIVPFIRLRDVFRVP-GVSPGMEQLVVVNALGSRFGLVVDCVIGE 661

Query: 984  QEIVIKPLGAYLGDLKGISGATIMGDGSVILILD 1017
             + VIK LG    D+ GISGATI GDGS+ LI+D
Sbjct: 662  HQTVIKSLGKVYKDIPGISGATIQGDGSMALIID 695



 Score = 74.7 bits (182), Expect = 2e-17
 Identities = 40/140 (28%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 14  FIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLGLNRINGLAHRAEN 73
           F+ EA++ L  +E  LLE+E+ P++ +L++ IFR MH++KG+    G + I    H  E+
Sbjct: 12  FVEEAQDLLAELETALLEIEERPEDRSLVDRIFRAMHTIKGSGAMFGFDDIASFTHDVES 71

Query: 74  IMDELRKGDMTVTSEIMDVILSATDALRQMVDNLDTTGGEGDVETESIIATIDAIMAGGA 133
           + D++R G+M ++ E++D+ L + D +  ++    T G   DV   + +      +  G 
Sbjct: 72  VFDKVRNGEMELSPELLDLTLKSRDHIAYLL-QCATKGLAVDVSMSADLTQALRALLPGD 130

Query: 134 PPAAPRPAPAAPAPAPAPEP 153
             A+  PA   P+      P
Sbjct: 131 DHASASPADEMPSSGEVEGP 150



 Score = 70.5 bits (171), Expect = 4e-16
 Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 1/82 (1%)

Query: 222 FIDEAREMAENLSSGLLELERNPTEQGELVNDLFRFFHNLKGNSGIIGFAELNSLTHEAE 281
           F++EA+++   L + LLE+E  P E   LV+ +FR  H +KG+  + GF ++ S TH+ E
Sbjct: 12  FVEEAQDLLAELETALLEIEERP-EDRSLVDRIFRAMHTIKGSGAMFGFDDIASFTHDVE 70

Query: 282 TLLNNVRRGEMTGSHELVDLLL 303
           ++ + VR GEM  S EL+DL L
Sbjct: 71  SVFDKVRNGEMELSPELLDLTL 92