Pairwise Alignments

Query, 1030 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 704 a.a., CheA signal transduction histidine kinases (RefSeq) from Shewanella sp. ANA-3

 Score =  315 bits (806), Expect = 9e-90
 Identities = 215/694 (30%), Positives = 351/694 (50%), Gaps = 80/694 (11%)

Query: 394  LFINTVRQQMDNVGVALKTLAVDGTQREYVDALYRCLVTIQNSSGYMGLDDIRVYAERTA 453
            +F     + ++N+   L  L +     E ++ ++R   +I+  SG  G   +        
Sbjct: 11   VFFEESHEHLENMEQLLLALDLAAPDPEELNTIFRAAHSIKGGSGIFGFTALTSVTHVME 70

Query: 454  GLVDQARFSGMDFSL-MVDLMEQETSIIGDML------------EKQIARISM------- 493
             L+D+ R    + S  ++DL+ +    +  +L            + + A+  +       
Sbjct: 71   NLLDKTRKGTFELSSSVIDLLLRTVDTLSHILNLYREEEPIDWQQVEFAKNQLVAALNGE 130

Query: 494  PAPAQAPEAAPAAPEAKAAPAPAAEA-----------------------------KAVAA 524
            P   QA +    A + K A      A                             +A  A
Sbjct: 131  PFSTQAAKVVETANQEKPAAVSTNSASQEDASFGFFEDEVELGLVDETEHFGFFDEAYTA 190

Query: 525  PPAAKTDVTTDARAAASVDAEDED---------------AEDDDAAVVTISSVTGTPAPA 569
                  D+ ++A  +A+  A  +D               A + DA    I +V  T  P 
Sbjct: 191  KEIRVEDIHSNAADSATHAAVSDDELGYGFFESLTAESFANELDALSTPIQNVQVTDKPV 250

Query: 570  --AAVKPAAPAPASAVAAPAASA--KPAAPVAPARPAAPTAPSAPAAPAGGQGAAAAAQ- 624
                V+ +    A +   P  SA  K  A       A     S+PA        AA++Q 
Sbjct: 251  YKTLVEQSDAKTARSKKPPKDSAQLKSQATTDVKLEAQTHLASSPAMNTTSATPAASSQV 310

Query: 625  AQQAGAAKASSTIRVDHEKLDHLMNLIGELIINRNRYTMLARRLEDDTNVVIAEVAQDLS 684
            A++A  +   +T+RV+  K+D L+NL GEL+I ++  T++   L         E+ + L 
Sbjct: 311  AKKASTSTQDATLRVETSKIDTLVNLAGELVITQSMLTLIGNELG-------GELGERLK 363

Query: 685  ETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLILEGEETELDK 744
                 + R + ++Q+ +M VRM+PVS VF+RF RLVRDLS + GK V L++EG  TE+DK
Sbjct: 364  TALNELERNTREMQEAVMSVRMLPVSFVFNRFHRLVRDLSEQLGKNVTLVIEGGNTEIDK 423

Query: 745  SVVEVIGDPLVHLIRNAVDHGVESEDERVAKGKKAKGKVTLRAYHKGNSVAIEIEDDGKG 804
             ++E + DPL HL+RN++DHG+E  ++RVA GK   G ++L+A  +G S+ I + DDG G
Sbjct: 424  GMIEKLVDPLTHLVRNSLDHGIEKPEKRVAAGKSEVGVLSLKASQRGGSIVIAVHDDGGG 483

Query: 805  IDPEKMREVAVRKGIITPDEAKAMDDREAMELIFAPGFSSAEKITDISGRGVGMDVVRTN 864
            ++ E++ + A   G+  P+    M D++  +LIFA GFS+A ++TD+SGRGVGMDVVR N
Sbjct: 484  LNRERILQKARENGMALPEN---MTDKQVWQLIFAAGFSTAAEVTDVSGRGVGMDVVRKN 540

Query: 865  IKNLKGSVSIHSEIGKGTRFTLSLPLTLAIIDALMVNVAGEMYAIPLDAVSETTKIEARR 924
            I+ L G + I S  G+G  F + LPLTLAI+D + V+V  ++Y +PL  + E+ + +  +
Sbjct: 541  IEALGGRIDIDSVAGEGATFEIQLPLTLAIVDGMSVSVGNQIYILPLVHIIESIQPQTEQ 600

Query: 925  LTDVKGRKAVTLRGEVLGIASLSELLGL-PKGDKQDVLSVVVIHDNDRRLGLVVDRLLER 983
            L  +   + + +R E L + +L +L+ + P+    +   VV++  N++R GL VD L+ +
Sbjct: 601  LKFLAKERLLRVREEYLPLLNLYQLMEIEPQAKTPEAGIVVLLESNNKRFGLCVDALVGQ 660

Query: 984  QEIVIKPLGAYLGDLKGISGATIMGDGSVILILD 1017
            Q++VIK L  +   + G+SGATIMGDGSV LILD
Sbjct: 661  QQVVIKSLEKHYRRIPGVSGATIMGDGSVALILD 694



 Score = 73.2 bits (178), Expect = 6e-17
 Identities = 35/92 (38%), Positives = 54/92 (58%)

Query: 14  FIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLGLNRINGLAHRAEN 73
           F  E+ EHLE +E  LL L+ A  +   LN IFR  HS+KG SG  G   +  + H  EN
Sbjct: 12  FFEESHEHLENMEQLLLALDLAAPDPEELNTIFRAAHSIKGGSGIFGFTALTSVTHVMEN 71

Query: 74  IMDELRKGDMTVTSEIMDVILSATDALRQMVD 105
           ++D+ RKG   ++S ++D++L   D L  +++
Sbjct: 72  LLDKTRKGTFELSSSVIDLLLRTVDTLSHILN 103



 Score = 68.6 bits (166), Expect = 2e-15
 Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 1/92 (1%)

Query: 222 FIDEAREMAENLSSGLLELERNPTEQGELVNDLFRFFHNLKGNSGIIGFAELNSLTHEAE 281
           F +E+ E  EN+   LL L+    +  EL N +FR  H++KG SGI GF  L S+TH  E
Sbjct: 12  FFEESHEHLENMEQLLLALDLAAPDPEEL-NTIFRAAHSIKGGSGIFGFTALTSVTHVME 70

Query: 282 TLLNNVRRGEMTGSHELVDLLLLVVDLLEALV 313
            LL+  R+G    S  ++DLLL  VD L  ++
Sbjct: 71  NLLDKTRKGTFELSSSVIDLLLRTVDTLSHIL 102