Pairwise Alignments

Query, 277 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 293 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

 Score =  135 bits (340), Expect = 1e-36
 Identities = 73/254 (28%), Positives = 142/254 (55%), Gaps = 7/254 (2%)

Query: 22  WTLAVLWALPLLYAVWTAF-HPSEFSTRFTLAAPLTLDNFRAAWDAA-----PFARYLVN 75
           + LA+ W  P L+ +  +F + ++  T    + PL+ DN+   +D       PF R L N
Sbjct: 34  FALAITWLYPYLWMLIGSFKNTADIYTTSLFSGPLSFDNYIFLFDGTGKAEKPFLRTLFN 93

Query: 76  TVLLVTMVLAGQLVLCTLAAYAFAKYDFPGKGILFALVLMQLMIMPDVLVVENYRTMSAI 135
           ++ + + +     +   L  YA AK +F G+ I   L+++Q++    + ++ ++  M  +
Sbjct: 94  SIFITSTITVCVTLSSCLIGYALAKMEFKGRDIFKNLLILQMVFPAFMFIIPHFVLMREL 153

Query: 136 GVLDSTLAIGLPYMASAFGIFLLRQTFKSIPKELDEAAAVEGASTLQILWKVYVPLGKPV 195
           G+++S  A+ LP++ + +GIF++ Q+FK  P +   AA ++ A  ++IL  V +PL K +
Sbjct: 154 GMINSYGALILPFVMNGWGIFMISQSFKGTPNDYIHAARLDHAGLIKILLHVMLPLNKSI 213

Query: 196 YLAYALVSVSYHWNNFLWPLIVTNTTNSRPLTVGLQVFSSTEQGVDWSIITAATLMTSGP 255
               A+ + +  W+NFLWPLIV    N  PL+V L  FS +  G+    + A +++ + P
Sbjct: 214 LAIVAIFTFTSAWDNFLWPLIVMQDANKMPLSVLLATFSKS-YGIYVGPVLAGSVVQTLP 272

Query: 256 LLIGFLLFQRQFVQ 269
           +++ F+LF++ F++
Sbjct: 273 IVVLFILFRKHFLE 286