Pairwise Alignments

Query, 277 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 320 a.a., putative ABC transporter permease protein from Phaeobacter inhibens DSM 17395

 Score =  141 bits (356), Expect = 2e-38
 Identities = 72/220 (32%), Positives = 126/220 (57%), Gaps = 1/220 (0%)

Query: 59  NFRAAWDAAPFARYLVNTVLLVTMVLAGQLVLCTLAAYAFAKYDFPGKGILFALVLMQLM 118
           N+  A+  AP  RYL+N +++   +   Q+V+   AAYA AK  F G+  +F LVL  L+
Sbjct: 101 NYSKAFTEAPLLRYLLNGIIVTGSIFLIQVVVALPAAYALAKLKFWGREAVFGLVLFCLL 160

Query: 119 IMPDVLVVENYRTMSAIGVLDSTLAIGLPYMASAFGIFLLRQTFKSIPKELDEAAAVEGA 178
           I    + +  Y  ++ +G+ ++  A+ +P+  S FGIFL+RQ F ++P +L +AA ++G 
Sbjct: 161 IPVHAIALPLYIMLAKLGLTNTYAALVVPWTISVFGIFLMRQFFMTVPDDLIDAARMDGM 220

Query: 179 STLQILWKVYVPLGKPVYLAYALVSVSYHWNNFLWP-LIVTNTTNSRPLTVGLQVFSSTE 237
               I+W+V +P   P  LA+A+ S+  HWN++ WP ++VT   +     +GL+ F    
Sbjct: 221 GEFSIVWRVMLPTAIPALLAFAIFSIVAHWNDYFWPRIVVTGNRDLFTPPLGLREFKGDG 280

Query: 238 QGVDWSIITAATLMTSGPLLIGFLLFQRQFVQSFMRAGIK 277
            G  +  + A   +   PL++ FLL Q++F++    +G+K
Sbjct: 281 DGSYFGPMMATATVIVTPLIVAFLLAQKRFIEGITLSGMK 320