Pairwise Alignments

Query, 794 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 711 a.a., chemotaxis protein CheA from Phaeobacter inhibens DSM 17395

 Score =  299 bits (766), Expect = 3e-85
 Identities = 199/619 (32%), Positives = 307/619 (49%), Gaps = 63/619 (10%)

Query: 184 AALPEASLSPDESAVSEPSAVSGE------SCREPRVYWLRYSPSPDALRRGLDPSRLLD 237
           +AL E     +E  V +P  + G          + RVY +R+ P  D    G +P  L  
Sbjct: 118 SALEEYIDEEEEEVVFQPMGLGGAFEMAAIEVEQERVYTIRFHPLKDMYGTGNEPYFLFQ 177

Query: 238 GLRGLGPLHVWPHCETVPGLDGLDAEAVHLRWDAVLVTEHPVDMVREPFAALLDEAGLEV 297
            L  LG L V      +PG D LD +  +L W   L T  P   +   F           
Sbjct: 178 TLADLGTLEVTLDESELPGFDALDTDESYLIWALTLTTTEPKSAIESVF----------- 226

Query: 298 AALGEERLLPSPEFLCGIAAQGRVADAVGLLEAADAGVEALRAVRGQGTRGDGGDASAAS 357
                       EF+ G+      +D   + E  DA   AL A+             AA 
Sbjct: 227 ------------EFVEGLCELSIDSD---MDEEDDA--NALAAL------------EAAF 257

Query: 358 GGQPGDASSRTSPRTLPSAPAVVPASWPVPEC--APPAGDDAAPAGTLRPGGDEGATTSL 415
           G  P +   +       +AP   P S P PE   AP A   AAP          G   +L
Sbjct: 258 GAAPEEGGDQV------TAPFEPPVSAPEPEAVEAPVAAKAAAPKAEAAKSEQRGPNPTL 311

Query: 416 RVDSAKVDRLLDNVGELVILQARLSRIATDHDDPRLREL---AEGLERLTESLRDSTMSV 472
           RVD  +VDRL++ VGEL+I  + L++   + D   LR++    EG + L   +++  MS+
Sbjct: 312 RVDLERVDRLINAVGELIINHSMLAQQIANLDVADLRDVETELEGFKNLARDIQEGVMSI 371

Query: 473 RMVPLDATFHAFRRLVRDLAARLGKDVRFVAEGGETELDKTVIDHLRDPLLHLVRNAMDH 532
           R  P+   F    R+VR+ ++  GK  + + EG  TE+DKTVI+ L DPL H++RNA+DH
Sbjct: 372 RAQPVKPLFQRMARIVREASSATGKTAKLITEGEGTEVDKTVIERLSDPLTHILRNAVDH 431

Query: 533 GVEPADVRLAAGKPAEAVLRLSAAHAGGEVLITVSDDGAGIDLDKLRAVGVARGLLAPDA 592
           G+E  + R AAGK     +RLSA+H  G V I + DDGAG++  +++ + + +GL+  +A
Sbjct: 432 GIEKPEDREAAGKTKSGEIRLSASHRSGSVCIEIKDDGAGVNRPRVKQIAIDKGLIPENA 491

Query: 593 DPGEAELLQLLFLPGFSTASGVSDLSGRGVGLDVVSTALGSLRGSVDVVTRQGEGTAWRL 652
           D  ++E+  LLFLPGFSTA  +S+LSGRGVG+DVV  A+ +L G +++ +  G+G+ + +
Sbjct: 492 DLSDSEIDNLLFLPGFSTAKEISNLSGRGVGMDVVKNAVTALGGRINIASTPGKGSVFTI 551

Query: 653 RIPLTLAIIDGLRVRVGDEAFILPLTQVQACL---ERFVDGEAATLGLIEYRERLVPCLS 709
            +PLTLA++DG+ V V D+  ++P+T +   +   +  V+   A   L+  R   VP   
Sbjct: 552 ILPLTLAVMDGMVVSVADQTMVVPITSIVETMRGSDDMVNNLGADGTLLSIRGNFVPVCD 611

Query: 710 LRRFL---EVPGEQPAYERVIIANVDGQPVGFAVDGVAGLEQAVIKRLGGPCRRAAWIAG 766
           +   L   +   +QP    +++    GQ    AVD +    Q VIK L G C     +A 
Sbjct: 612 VGGALGLSKADQDQPPGVYLLVETETGQRSALAVDDIHDQRQVVIKSLDGVCGNIPGVAA 671

Query: 767 SSVDAEGGISLILDAAQLV 785
           +++  +G I++ILD   ++
Sbjct: 672 ATILGDGKIAMILDPESIL 690



 Score = 66.6 bits (161), Expect = 4e-15
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 5   GTARRVFTEEARDLLIDLEEALLELESHPGDAALMARVFRALHTLKGTGAMFGFDAVARF 64
           G+ +  F EE  +LL  ++E L  +E    D  ++  VFRA+H++KG    FG D +  F
Sbjct: 3   GSIQDTFFEECEELLEAMDEGLTAIEGGDHDPEVVNAVFRAVHSIKGGAGAFGLDELVAF 62

Query: 65  THAVEDLFDSVRKAGVPATSELLALGLDAKDHLQELL 101
            H  E +FD VR   +   ++L+ L L   DHL +L+
Sbjct: 63  AHKFETVFDEVRANRLQLDTKLIQLLLRCSDHLSDLV 99