Pairwise Alignments

Query, 794 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 657 a.a., chemotaxis protein CheA from Dyella japonica UNC79MFTsu3.2

 Score =  284 bits (726), Expect = 1e-80
 Identities = 166/408 (40%), Positives = 242/408 (59%), Gaps = 8/408 (1%)

Query: 387 PECAPPAGDDAAPAGTLRPGGDEGATTSLRVDSAKVDRLLDNVGELVILQARLSRIATDH 446
           P  A PA   A  A          A +S+RV   K+D L++ VGELVI Q+ L     D 
Sbjct: 242 PAAAAPAAAAAPIAAKAAAREAVAAESSVRVGIDKIDSLINLVGELVITQSMLDTFREDF 301

Query: 447 DDPRLRELAEGLERL---TESLRDSTMSVRMVPLDATFHAFRRLVRDLAARLGKDVRFVA 503
           D  RL  L +GL +L   T +L++S M +RM+P+ + F+ F R+VRDL  +LGK VR   
Sbjct: 302 DASRLEMLQQGLAQLARHTRTLQESVMGIRMLPIASVFNRFPRMVRDLGQKLGKQVRLDL 361

Query: 504 EGGETELDKTVIDHLRDPLLHLVRNAMDHGVEPADVRLAAGKPAEAVLRLSAAHAGGEVL 563
            G +TELDKTV++ + DPL+HLVRNA+DHG+E  D R AAGK     LRL A+H  G ++
Sbjct: 362 VGEQTELDKTVLEKIGDPLVHLVRNAIDHGLETPDRRRAAGKGDIGTLRLEASHRNGSIV 421

Query: 564 ITVSDDGAGIDLDKLRAVGVARGLLAPDADPGEAELLQLLFLPGFSTASGVSDLSGRGVG 623
           + +SDDGAG++ + + A  + RGL+A      +  +  L+F PGFSTA+  +DLSGRGVG
Sbjct: 422 VEISDDGAGLNREAIVAKALQRGLIASGEGMTDEAVADLIFQPGFSTAAVTTDLSGRGVG 481

Query: 624 LDVVSTALGSLRGSVDVVTRQGEGTAWRLRIPLTLAIIDGLRVRVGDEAFILPLTQVQAC 683
           +DVV   +  L GS+ + +  G+G+ + + +PLTLAIIDGL   VG E +I+PL  +   
Sbjct: 482 MDVVRRNVVDLGGSIQIRSVAGQGSVFTITLPLTLAIIDGLTAMVGGEHYIVPLASIVET 541

Query: 684 LERFVDGEAATLG---LIEYRERLVPCLSLRRFLEVPGEQPAYER--VIIANVDGQPVGF 738
           ++   +      G   L  +R+  +P L L+      G + A E+  V++   DG  VG 
Sbjct: 542 VQLRGEQLRTVTGGGELFHFRDSWLPVLRLQDAFACGGTRRAIEQGLVVVVEGDGARVGL 601

Query: 739 AVDGVAGLEQAVIKRLGGPCRRAAWIAGSSVDAEGGISLILDAAQLVR 786
            VD + G +QAV+K L    RR   I+G+++ A+G ++LI+D A L R
Sbjct: 602 FVDELVGQQQAVVKSLEANYRRVIGISGATILADGSVALIVDVAGLSR 649



 Score = 73.9 bits (180), Expect = 3e-17
 Identities = 85/325 (26%), Positives = 121/325 (37%), Gaps = 69/325 (21%)

Query: 9   RVFTEEARDLLIDLEEALLELESHPGDAALMARVFRALHTLKGTGAMFGFDAVARFTHAV 68
           + F +E+ + L  +E ALL L+   GD  L+  +FRA H++KG  A FGF  +A FTH  
Sbjct: 11  QTFFDESHEGLDAMETALLALDGG-GDKELVHGIFRAAHSIKGGAATFGFPDMAAFTHEA 69

Query: 69  EDLFDSVRKAGVPATSELLALGLDAKDHLQELLERGASDPVAGKTPSADRAEDAADADGL 128
           E L D +R       + ++ L L + D L+ +  R      AG+ P AD A +       
Sbjct: 70  ESLLDELRDGRRAVDAGIVELLLRSVDCLRGMFARAQ----AGQ-PLADAASE------- 117

Query: 129 AARERALLDRIAGLAARWIAPAVASGAFAASSGVRDDDAAGAAETSPTVQAQDFPAALPE 188
                AL   +A +  R +APA A          R DDA+                    
Sbjct: 118 -----ALRHELAAVVGRSLAPAAAPAR-------RSDDASTG------------------ 147

Query: 189 ASLSPDESAVSEPSAVSGESCREPRVYWLRYSPSPDALRRGLDPSRLLDGLRGLGPLHVW 248
                                     + + + P    L  G D  RLL  L  LG L   
Sbjct: 148 --------------------------WAISFRPHQGMLAGGNDALRLLRELGELGELKAE 181

Query: 249 PHCETVPGLDGLDAEAVHLRWDAVLVTEHPVDMVREPFAALLDEAGLEVAALGEERLLPS 308
              + +PGL  LD    HL W   L  +     V+  F  + DE  L +  L    +  +
Sbjct: 182 AELDRLPGLGALDPSECHLGWRLELRGDVSRAAVKGVFDWVEDECDLTLEPLPGAEVHHA 241

Query: 309 PEFLCGIAAQGRVADAVGLLEAADA 333
           P      AA   +A      EA  A
Sbjct: 242 PAAAAPAAAAAPIAAKAAAREAVAA 266