Pairwise Alignments

Query, 281 a.a., glutamate synthase alpha subunit domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1482 a.a., glutamate synthase, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 41/213 (19%)

Query: 51   VQVRGQRYIATAV-----EGDVRFTVRGVPGQDLGAFMR-GPTIHVHGNAQDGVGNTMDG 104
            V  R   YIAT +     +  ++ +  G  GQ  G +   G  + + G+A D VG  M G
Sbjct: 1243 VGARLSGYIATTLGVKGSKAPIKLSFNGSAGQSFGVWNSPGLELKLCGDANDYVGKGMSG 1302

Query: 105  GRIVIH------------GMAGDVLGYAMRDGRILVRGDVGYRVGIHMKAYMDRVPVIVV 152
            G+IVI+             + G+   Y    GR    G  G R  +          + VV
Sbjct: 1303 GKIVIYPPLGSPFQSERSAIVGNTCLYGATGGRFFAAGQAGERFAVRNSG-----AIAVV 1357

Query: 153  GGKAGDFLGEYMAGGAIILLGMHSGMADAPITGRNLGTGMHGGVIYLRGRVPEYQLGPGL 212
             G  GD   EYM  G +++LG          TG N G GM GG  Y+  +   +     +
Sbjct: 1358 EG-LGDNGCEYMTSGIVVVLGK---------TGVNFGAGMTGGFAYVFDQFGRF--NRRV 1405

Query: 213  SMEPVDEADLE------FLRGHVADFAAEFAGE 239
            + E VD   LE       L+G + +  AE   E
Sbjct: 1406 NSELVDTQKLESPIQQQHLKGLIEEHVAETGSE 1438