Pairwise Alignments

Query, 292 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 263 a.a., nitrate transport permease from Synechococcus elongatus PCC 7942

 Score =  125 bits (313), Expect = 1e-33
 Identities = 77/238 (32%), Positives = 130/238 (54%), Gaps = 14/238 (5%)

Query: 37  RWFLHTVSIVAFFSLWDWLARSNVLGGGSSALARPHEVLEQLVVLTREELAE-----LTL 91
           RW +  +S++AF ++W   A S  LG       R    L+ L     +   +     L +
Sbjct: 11  RWAVSILSVLAFLAIWQIAAASGFLGKTFPGSLR---TLQDLFGWLSDPFFDNGPNDLGI 67

Query: 92  WGHVWASTQRVVVGFSIAAAIAVPLGLFMALNRYVNAIVKPLFDLLKPMPPISWISISIL 151
             ++  S +RV +G+ +A  +A+PLG+ + ++   ++I  P   LLKP+ P++W+ I + 
Sbjct: 68  GWNLLISLRRVAIGYLLATVVAIPLGIAIGMSALASSIFSPFVQLLKPVSPLAWLPIGLF 127

Query: 152 WFGIGETSKVFIIVLGTFVPCLLNSYNGVRLVEPELYDVVRMLGGKRRDEILHVCFPASF 211
            F   E + VF+I++ +  P L+N+  GV  V P+   V + LG  R   IL V  PA+ 
Sbjct: 128 LFRDSELTGVFVILISSLWPTLINTAFGVANVNPDFLKVSQSLGASRWRTILKVILPAAL 187

Query: 212 PAIFAGLQISLSIAWTCVLAAELVSARSGLGYII-VQGMNLSQP----AMVIGGMAVI 264
           P+I AG++IS+ IAW  ++AAE++   +G+GY I  +  NLS P    A++I G+  I
Sbjct: 188 PSIIAGMRISMGIAWLVIVAAEMLLG-TGIGYFIWNEWNNLSLPNIFSAIIIIGIVGI 244