Pairwise Alignments

Query, 288 a.a., transcriptional regulator, GntR family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 234 a.a., histidine utilization repressor (RefSeq) from Shewanella amazonensis SB2B

 Score = 89.7 bits (221), Expect = 5e-23
 Identities = 66/242 (27%), Positives = 112/242 (46%), Gaps = 13/242 (5%)

Query: 1   MGKSKYLVIYEWLSEQIRNKVYQPGDKIPNESDLAAMFGVHRMTVRQAIDKLVNDHMLVR 60
           M  +K+  I E++   I    ++   ++P+E+ LA  FG  RMT R+A+ +LV   +L R
Sbjct: 1   MATAKFAEIKEYIRRHIEAGEWEENTRVPSENQLAEQFGCSRMTARRALTELVEAGVLER 60

Query: 61  KRSKGTFLLSEKSPVLTRSLESITTYYDDIVSAGLAPHYKTIAAGIEYADAEVAAHLNLA 120
            +  GTF+ S KS     S+ SI    D+I   G     + +      A   +A  L L 
Sbjct: 61  SQGLGTFVASLKS---QSSMLSIRNIADEIKGRGHGHSVQVVELAAINAIPPIAIALGLE 117

Query: 121 ERQPVIFLYRLMLASGVPLVLERSILPTDMVPDFLEKKLDTVLYKVLHE--DYGMRLLYS 178
           E   V +   +    G+PL LE   +   + P +L +    +     HE   +   L  +
Sbjct: 118 EGTEVFYSLLVHCEQGIPLQLEERFVNPSLAPGYLRQDFSQL---TPHEYLSHVAPLTEA 174

Query: 179 RQELGAVMPTESERKHLKIGDNCPCIWVESVVYTDTGRAVEYSRALHRGDKYRFRCAIGG 238
           R  + A+MP E  R  L I +  PC+ +    ++  G  V ++R +H G ++R    +GG
Sbjct: 175 RHTIEAIMPKEQIRNSLNIPEGEPCLQIIRRTWSRQG-VVSFARLVHPGSRFR----LGG 229

Query: 239 YV 240
           ++
Sbjct: 230 HL 231