Pairwise Alignments

Query, 492 a.a., DNA repair protein RadA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 454 a.a., DNA repair protein RadA (RefSeq) from Shewanella amazonensis SB2B

 Score =  303 bits (775), Expect = 1e-86
 Identities = 174/437 (39%), Positives = 256/437 (58%), Gaps = 5/437 (1%)

Query: 2   KLRETYVCTACGARAPQWRGQCPACKEWNTL-ELTV-APREGKAGARPGASSVGAQSRAQ 59
           K +  YVC  CG   P+W+GQC AC EWN++ E+ + A    ++G   G +  G  S  +
Sbjct: 3   KNKTAYVCNECGQDFPRWQGQCSACLEWNSITEVRLGAATVARSGRFSGYAGAGV-SEVK 61

Query: 60  PLKDVADHGAEPFGSGLDALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGAVAAAGR 119
            L  +  +      S     DRVLG G+VPG+AIL+GG PG GKSTLLLQ    +A    
Sbjct: 62  TLDQIDLNELPRIPSSFTEFDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCQLAEV-M 120

Query: 120 GVLYLSGEESLPQLKARAARLGVLHDELMAVATTRLDDVLPHLEGPEAPALLIVDSVQTV 179
             LY++GEESL Q+  RA RLG+   +L  ++ T ++  L  +   E P L++VDS+Q +
Sbjct: 121 PALYVTGEESLQQVAMRAHRLGLPTSKLKMLSETSVE-TLCDIALKEQPKLIVVDSIQVM 179

Query: 180 SSDRAEGLPGNVSQVRAVSTEIVEACKRSGTTVLLVGHVTKDGALAGPRLLEHLVDTVIS 239
                +  PG+V+QVR  ++ +    K++G  V++VGHVTKDG+LAGP++LEH +D  + 
Sbjct: 180 HMSDVQSSPGSVAQVRESASFLTRFAKQNGIAVIMVGHVTKDGSLAGPKVLEHCIDCSVM 239

Query: 240 IEGDRRQMFRLLRVLKNRFGPNQELLVFRMVEQGMEVVEDPSTFFLGARDPALSGTALVM 299
            EGD    +R LR  KNRFG   EL VF M E+G++ V +PS  FL   + A SG+ +++
Sbjct: 240 FEGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEASSGSLVMV 299

Query: 300 AVDGQRPLAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAKI 359
             +G RPL VE+Q LV  S L+ PRR  +G D NRL +LLAV+ +   L     D++  +
Sbjct: 300 VWEGTRPLLVELQVLVDNSALSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVFVNV 359

Query: 360 GGGMKLQDPGMDLGLVAAVLSSFYDLPLPERAVFWGEVDLNGQVRPVAAHTIRRDQARRL 419
            GG+K+ +   DL L+ A++SSF    LP   V +GEV L+G++RPV     R  +A + 
Sbjct: 360 VGGVKVTETSADLTLLLAMVSSFRGEVLPRDLVAFGEVGLSGEIRPVPNGQERLVEAAKH 419

Query: 420 GYTPILHPADDAARGVP 436
           G+   + P  +  +  P
Sbjct: 420 GFKRAIVPRANMPKKPP 436