Pairwise Alignments

Query, 492 a.a., DNA repair protein RadA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 458 a.a., DNA repair protein RadA from Pedobacter sp. GW460-11-11-14-LB5

 Score =  320 bits (819), Expect = 9e-92
 Identities = 168/426 (39%), Positives = 257/426 (60%), Gaps = 7/426 (1%)

Query: 2   KLRETYVCTACGARAPQWRGQCPACKEWNTLELTVAPREGKAGARPGASSVGAQSRAQPL 61
           K +  + C +CG  + +W G+CP+C +WNT    +  +   A      S   ++  ++P 
Sbjct: 3   KSKSAFFCQSCGYESAKWLGKCPSCNQWNTFVEEIVEKSS-AAVPTWKSDTSSRKLSKPS 61

Query: 62  K--DVADHGAEPFGSGLDALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGAVAAAGR 119
           K  ++         +G   LDRVLG GLV G+ +L+GGEPGIGKSTL+LQ+A  +   G+
Sbjct: 62  KVDEIQSSTERRILTGDKELDRVLGGGLVEGSLVLIGGEPGIGKSTLMLQLA--LNLKGK 119

Query: 120 GVLYLSGEESLPQLKARAARLGVLHDELMAVAT-TRLDDVLPHLEGPEAPALLIVDSVQT 178
            +LY+SGEES  Q+K RA R+         + T T   ++   +E  E P +L+VDS+QT
Sbjct: 120 KLLYISGEESEQQIKMRAERIQESPSSNCYILTETSTQNIFKQIEILE-PEILVVDSIQT 178

Query: 179 VSSDRAEGLPGNVSQVRAVSTEIVEACKRSGTTVLLVGHVTKDGALAGPRLLEHLVDTVI 238
           + S   +  PG+VSQVR  + E++   K +G  V L+GH+TKDGA+AGP++LEH+VDTV+
Sbjct: 179 LHSAHIDSTPGSVSQVRECTAELLRFAKETGVPVFLIGHITKDGAIAGPKILEHMVDTVL 238

Query: 239 SIEGDRRQMFRLLRVLKNRFGPNQELLVFRMVEQGMEVVEDPSTFFLGARDPALSGTALV 298
             EGDR  ++R+LR +KNRFG   EL ++ M   G+  V +PS   L  RD  LSG A+ 
Sbjct: 239 QFEGDRHHVYRILRSIKNRFGAAAELGIYEMQGSGLREVSNPSEILLSQRDEELSGIAIA 298

Query: 299 MAVDGQRPLAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAK 358
             ++G RP+ +E QALV+ +    P+R+  GFD  R+++LLAVLEKR        D++  
Sbjct: 299 ATLEGARPMLIETQALVSSAAYGTPQRSATGFDTKRMNMLLAVLEKRCGFRLSTQDVFLN 358

Query: 359 IGGGMKLQDPGMDLGLVAAVLSSFYDLPLPERAVFWGEVDLNGQVRPVAAHTIRRDQARR 418
           I GG++++DP +DL ++ A++SS  D+ +  +  F  EV L+G++R V     R  +A +
Sbjct: 359 IAGGIRVEDPAIDLAILIAIISSHQDIAVSSKNCFAAEVGLSGEIRAVNRIEQRIAEADK 418

Query: 419 LGYTPI 424
           LG+  I
Sbjct: 419 LGFETI 424