Pairwise Alignments

Query, 492 a.a., DNA repair protein RadA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 456 a.a., DNA repair protein RadA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  684 bits (1765), Expect = 0.0
 Identities = 347/453 (76%), Positives = 387/453 (85%), Gaps = 3/453 (0%)

Query: 2   KLRETYVCTACGARAPQWRGQCPACKEWNTLELTVAPREGKAGARPGASSVGAQSRAQPL 61
           K+RETYVC+ACGA  PQWRGQCP CK WNTL+     RE ++G R   +    + R  PL
Sbjct: 3   KVRETYVCSACGANTPQWRGQCPTCKAWNTLDAVTVARETRSGVRRQGAPDSVRPR--PL 60

Query: 62  KDVADHGAEPFGSGLDALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGAVAAAGRGV 121
           +DV+D G  PFG+GL+ALDRVLG GLVPGAAIL GGEPGIGKSTLLLQVAGAVAA+GR V
Sbjct: 61  RDVSDEGGSPFGTGLEALDRVLGSGLVPGAAILFGGEPGIGKSTLLLQVAGAVAASGRDV 120

Query: 122 LYLSGEESLPQLKARAARLGVLHDELMAVATTRLDDVLPHLEGPEAPALLIVDSVQTVSS 181
           LYLSGEESL QLK RA RLGVLH+ L+AVAT+R++DV   LE    PALL++DSVQT++S
Sbjct: 121 LYLSGEESLTQLKGRAERLGVLHERLLAVATSRVEDVFSVLESGTPPALLVLDSVQTLTS 180

Query: 182 DRAEGLPGNVSQVRAVSTEIVEACKRSGTTVLLVGHVTKDGALAGPRLLEHLVDTVISIE 241
           D AEGLPGNVSQVRAV+TE+V+ CKR+GT VLLVGHVTKDG LAGPRLLEH+VDTV+S+E
Sbjct: 181 DLAEGLPGNVSQVRAVATEVVDRCKRAGTAVLLVGHVTKDGNLAGPRLLEHMVDTVVSLE 240

Query: 242 GDRRQMFRLLRVLKNRFGPNQELLVFRMVEQGMEVVEDPSTFFLGARDPALSGTALVMAV 301
           GDRRQMFRLLRVLKNRFGPNQELLVF+M ++G+EVVEDPSTFFLGARDPALSGTA+VMAV
Sbjct: 241 GDRRQMFRLLRVLKNRFGPNQELLVFQMAQRGLEVVEDPSTFFLGARDPALSGTAVVMAV 300

Query: 302 DGQRPLAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAKIGG 361
           DGQRP AVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAKIGG
Sbjct: 301 DGQRPFAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAKIGG 360

Query: 362 GMKLQDPGMDLGLVAAVLSSFYDLPLPERAVFWGEVDLNGQVRPVAAHTIRRDQARRLGY 421
           GM+LQDPGMDL LVAAVLSSFYD+ LPERAV WGEVDLNGQVRPVAAH IR  QA RLGY
Sbjct: 361 GMRLQDPGMDLALVAAVLSSFYDVALPERAVLWGEVDLNGQVRPVAAHDIRLGQAARLGY 420

Query: 422 TPILHPADDAARGVPTVAALQDALFRRARRPSY 454
            P+LHP +     VPTV  LQ  LF ++  P +
Sbjct: 421 GPVLHPGEGRG-AVPTVVELQARLFGKSGAPRH 452