Pairwise Alignments

Query, 492 a.a., DNA repair protein RadA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 455 a.a., DNA repair protein RadA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  358 bits (918), Expect = e-103
 Identities = 194/425 (45%), Positives = 268/425 (63%), Gaps = 9/425 (2%)

Query: 7   YVCTACGARAPQWRGQCPACKEWNTLELTVAPREGKAGARPGASSVGA-QSRAQPLKDVA 65
           ++C  CGA   +W G+C  C  WN++       E    A P   S+G  + +  PL D+A
Sbjct: 8   FICAECGAAHSKWSGRCDGCGAWNSIS-----EEVPLSAGPSKKSLGGIRGKKVPLGDLA 62

Query: 66  DHGAEP--FGSGLDALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGAVAAAGRGVLY 123
              A P    S L+ LDRVLG GLV  +A+LVGG+PGIGKSTLLLQ A + A AG   +Y
Sbjct: 63  SEDAPPPRRTSQLEELDRVLGGGLVDASAVLVGGDPGIGKSTLLLQAAASFARAGAKAVY 122

Query: 124 LSGEESLPQLKARAARLGVLHDELMAVATTRLDDVLPHLEGPEAPALLIVDSVQTVSSDR 183
           +SGEE+  Q++ RA RLG+    +   A T L D+L  LE  EAP L I+DS+QT+ SD 
Sbjct: 123 ISGEEATSQVRMRARRLGLADAAVKLGAETNLRDILTTLEA-EAPDLAILDSIQTLWSDT 181

Query: 184 AEGLPGNVSQVRAVSTEIVEACKRSGTTVLLVGHVTKDGALAGPRLLEHLVDTVISIEGD 243
            +  PG+V+QVRA + E+V   KRSGT+V+LVGHVTK+G +AGPR++EH+VDTV+  EG+
Sbjct: 182 VDSAPGSVAQVRACAHELVTFAKRSGTSVILVGHVTKEGQIAGPRVVEHMVDTVLYFEGE 241

Query: 244 RRQMFRLLRVLKNRFGPNQELLVFRMVEQGMEVVEDPSTFFLGARDPALSGTALVMAVDG 303
           R   FR+LR +KNRFGP  E+ VF M   G+  V +PS  FL  RD    G+ +   ++G
Sbjct: 242 RGHQFRILRSVKNRFGPADEIGVFEMTGAGLAEVANPSALFLSGRDAPAPGSVVFAGIEG 301

Query: 304 QRPLAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAKIGGGM 363
            RP+  E+QALV  S LA  RRT +G+D  RL ++LAVLE R  + F  +D+Y  + GG+
Sbjct: 302 TRPVLCELQALVAPSALANARRTVVGWDSGRLSMILAVLEARCGIPFTGLDVYLNVAGGL 361

Query: 364 KLQDPGMDLGLVAAVLSSFYDLPLPERAVFWGEVDLNGQVRPVAAHTIRRDQARRLGYTP 423
           ++ +P  DL +  A+LS+  D+ LP   V +GE+ L+G +RPV     R  +A +LG+T 
Sbjct: 362 RIGEPAADLAVATALLSAREDIALPAEMVVFGEISLSGALRPVGQTENRLKEAAKLGFTK 421

Query: 424 ILHPA 428
            L PA
Sbjct: 422 ALAPA 426