Pairwise Alignments

Query, 492 a.a., DNA repair protein RadA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 499 a.a., DNA repair protein RadA from Bifidobacterium breve UCC2003

 Score =  329 bits (843), Expect = 2e-94
 Identities = 193/463 (41%), Positives = 255/463 (55%), Gaps = 43/463 (9%)

Query: 7   YVCTACGARAPQWRGQCPACKEWNTLEL--TVAPREGKAGARPGASSVG--------AQS 56
           YVC+ CG   P+W G+CP C +W T+E      P  G   A PG +S          A++
Sbjct: 8   YVCSECGWNGPKWYGRCPECGQWGTVEEFHEARPAAGSHTAAPGRTSRTRSAAVPDTARA 67

Query: 57  RAQPLKDVADHGAEPFGSGLDALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGAVA- 115
            A+P+ ++     E  G+G    DRVLG G+VPG+  L+ GEPGIGKSTLLLQ AG +A 
Sbjct: 68  AAKPITEIGTETVERLGTGFSEFDRVLGGGVVPGSVTLIAGEPGIGKSTLLLQTAGNIAR 127

Query: 116 ---------AAGRG----------------VLYLSGEESLPQLKARAARLGVLHDELMAV 150
                    AAGRG                VLY+SGEES  Q++ RA R+  +   L+  
Sbjct: 128 TVAEGQTINAAGRGQSSHRPSGLASTRAHTVLYISGEESQAQVRLRATRINAVEPNLLLA 187

Query: 151 ATTRLDDVLPHLEGPEAPALLIVDSVQTVSSDRAEGLPGNVSQVRAVSTEIVEACKRSGT 210
           ATT L  VL  +E    PAL IVDS QT+ S   +G+ G  +QVR V++ +++  K    
Sbjct: 188 ATTDLATVLGLIE-QNKPALAIVDSAQTIVSQEVDGISGGSTQVREVASALIDTAKTLDI 246

Query: 211 TVLLVGHVTKDGALAGPRLLEHLVDTVISIEGDRRQMFRLLRVLKNRFGPNQELLVFRMV 270
            V LVGHVTKDG++AGPR LEHLVD V   EGD     R+LR  KNRFGP  E+  F M 
Sbjct: 247 PVFLVGHVTKDGSIAGPRTLEHLVDVVCQFEGDSETALRMLRAAKNRFGPTDEVGCFDMS 306

Query: 271 EQGMEVVEDPSTFFL------GARDPALSGTALVMAVDGQRPLAVEVQALVTRSYLAIPR 324
            +G+E V DP+  FL       A D  + GT +   +DG R L +EVQALVT S L  PR
Sbjct: 307 GEGIEEVTDPAGLFLSGDGPESANDAPVEGTCVTFTLDGHRSLPIEVQALVTNSVLPTPR 366

Query: 325 RTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAKIGGGMKLQDPGMDLGLVAAVLSSFYD 384
           R   G D +R+ +L+AVL +  +LN    D+Y     G + ++PG DL +V A+ S+   
Sbjct: 367 RAVNGVDPSRIAMLVAVLYRHSKLNLLSNDLYISTIAGGQAKEPGSDLAIVGALASAATS 426

Query: 385 LPLPERAVFWGEVDLNGQVRPVAAHTIRRDQARRLGYTPILHP 427
            P+       GE+ L GQVRPV     R  +A RLG+T  + P
Sbjct: 427 KPIARSTCAIGEISLTGQVRPVPRMEYRLREAARLGFTTAVIP 469