Pairwise Alignments

Query, 492 a.a., DNA repair protein RadA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 458 a.a., DNA repair protein RadA from Burkholderia phytofirmans PsJN

 Score =  338 bits (867), Expect = 2e-97
 Identities = 183/440 (41%), Positives = 269/440 (61%), Gaps = 17/440 (3%)

Query: 2   KLRETYVCTACGARAPQWRGQCPACKEWNTLELTVAPREGKAGARPGASSVGAQSRAQPL 61
           K +  Y+C+ CG ++P+W GQCP+C  WNTL  +VA         P      A +++ P+
Sbjct: 3   KPKTLYICSECGGQSPKWAGQCPSCNAWNTLVESVAEA-------PSTHRFQALAKSAPV 55

Query: 62  KDVADHGAEP---FGSGLDALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGAVAAAG 118
           + +AD  A     F +G+   DRVLG GLVPG  +L+GG+PGIGKSTLLLQ    +AA  
Sbjct: 56  RRLADIEASDVPRFSTGVSEFDRVLGGGLVPGGVVLIGGDPGIGKSTLLLQSLAEIAADK 115

Query: 119 RGVLYLSGEESLPQLKARAARLGVLH-----DELMAVATTRLDDVLPHLEGPEAPALLIV 173
           R  LY+SGEES  Q+  RA RL +L       EL  +A  +L+ +   +   + P + ++
Sbjct: 116 RA-LYISGEESAAQIALRAQRLSLLEPGSKASELQLLAEIQLEKIQATIS-EQRPDVAVI 173

Query: 174 DSVQTVSSDRAEGLPGNVSQVRAVSTEIVEACKRSGTTVLLVGHVTKDGALAGPRLLEHL 233
           DS+QTV SD     PG+V+QVR  + ++    K+SGTT+++VGHVTK+GALAGPR+LEH+
Sbjct: 174 DSIQTVYSDALTSAPGSVAQVRECAAQLTRIAKQSGTTIIMVGHVTKEGALAGPRVLEHI 233

Query: 234 VDTVISIEGDRRQMFRLLRVLKNRFGPNQELLVFRMVEQGMEVVEDPSTFFLGARDPALS 293
           VDTV+  EGD    +RL+R +KNRFG   EL VF M E+G+  V +PS  FL   + ++ 
Sbjct: 234 VDTVLYFEGDTHSSYRLVRAIKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQSVP 293

Query: 294 GTALVMAVDGQRPLAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQV 353
           G+ +++  +G RPL VEVQALV  +    PRR  +G + NRL +LLAVL +   +     
Sbjct: 294 GSCVLVTQEGTRPLLVEVQALVDSANAPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQ 353

Query: 354 DIYAKIGGGMKLQDPGMDLGLVAAVLSSFYDLPLPERAVFWGEVDLNGQVRPVAAHTIRR 413
           D++    GG+K+ +P  DL ++ A+ SS  + PLP+  V +GEV L G++RP      R 
Sbjct: 354 DVFLNAVGGVKITEPAADLAVLLAIHSSMRNKPLPKGLVVFGEVGLAGEIRPSPRGQERL 413

Query: 414 DQARRLGYTPILHPADDAAR 433
            +A +LG++  + P  +A +
Sbjct: 414 KEAAKLGFSVAVIPKANAPK 433