Pairwise Alignments

Query, 762 a.a., integral membrane sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1763 a.a., sensory box histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  227 bits (579), Expect = 4e-63
 Identities = 133/386 (34%), Positives = 216/386 (55%), Gaps = 13/386 (3%)

Query: 371  ELREARSQSEIANHAKSLFLANMSHELRTPLNGLLGMLQLIKGNEDANERDAYLDLAQRS 430
            EL  A+  ++ AN AKS FLANMSHE+RTP+N ++GM QL    E   ++  Y++  +R+
Sbjct: 1022 ELMAAKEDADAANQAKSDFLANMSHEIRTPMNAIIGMSQLCLQTELDRKQRNYVEKIERA 1081

Query: 431  GRRLTDLLGDLLDLSRIEAGGMRIQSRPFTLTSTFAALAETFSPMHQSKRVPLILACAPE 490
             + L  ++ D+LD S+IEAG + I+  PF L +    L + FS     K++ L+ + AP 
Sbjct: 1082 SKSLLGIINDILDFSKIEAGKLDIEVVPFQLDTILEDLGDMFSVKAADKQLELLFSVAPG 1141

Query: 491  IPPVLVGDEVHLRQILFNLVGNAMKFTEKGEVRLEVFPLPPMPSGEVRLLFIVTDTGIGI 550
            +P  L GD + L Q+L NL+ NA+KFTE+GEV L +  L      +V+L F V D+GIG+
Sbjct: 1142 VPTHLEGDPLRLSQVLINLMNNAIKFTERGEVMLSISEL-ARDEDQVQLKFAVRDSGIGL 1200

Query: 551  PDDKLDHIVRPFAQVEESYTRSHQGAGLGLAIVRNLVLAMGGTLQFDSQVGEGTSVCMTM 610
              ++   + + F+Q + S TR + G GLGLAI + LV  MGG +  DSQ G G++   T+
Sbjct: 1201 TAEQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGEIGVDSQFGNGSTFYFTV 1260

Query: 611  PFRLPDRTTHIAPQQDTPVGTAHGGLRILLAEDDEVSRLCARRLLEQMGHEVTTTANGAQ 670
                   +  +A      V     G+ +L+ +D+  +R   R  L+ MG  V +  +G +
Sbjct: 1261 -------SVKVAQNAQLNVEQELEGMAVLVVDDNSTARDILRTTLQSMGFSVDSARSGME 1313

Query: 671  ALDALRAKRFDCVLMDVQMDVMDGVEATRQIRDGASGVLDARIPVIAMTAYAMAGDREKF 730
            AL+    + +   L+D +M  MDG E   ++R+     L     ++ ++A+A +   +K 
Sbjct: 1314 ALEKCAERDYRIALIDWKMPEMDGTETAARMRELKQPPL-----ILMVSAHANSEFIDKV 1368

Query: 731  LAQGMDGYVSKPVMSAELAAAIAGAL 756
               G++GY++KP+ ++ L   I  AL
Sbjct: 1369 EEMGINGYITKPISASRLLDGIMSAL 1394



 Score = 94.7 bits (234), Expect = 4e-23
 Identities = 53/109 (48%), Positives = 74/109 (67%), Gaps = 3/109 (2%)

Query: 635  GLRILLAEDDEVSRLCARRLLEQMGHEVTTTANGAQALDALRAKRFDCVLMDVQMDVMDG 694
            G RILL ED+E+++  A   LEQ+G  ++   NG  AL+ L  + FD VLMD QM VMDG
Sbjct: 1419 GKRILLVEDNEMNQEVASEFLEQVGVVLSIADNGQIALEKLGQQSFDLVLMDCQMPVMDG 1478

Query: 695  VEATRQIRDGASGVLDARIPVIAMTAYAMAGDREKFLAQGMDGYVSKPV 743
             +ATR++R    G+  A +PV+AMTA AMAGD+E  L  GM+ +++KP+
Sbjct: 1479 YQATRELRK-LPGL--AELPVVAMTANAMAGDKEMCLLAGMNDHIAKPI 1524



 Score = 34.3 bits (77), Expect = 6e-05
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 290 LGILLLMVVLTLGSGWFLGGRNVGRRLEELAAAATRIGAGDLDTRVEPERGVTEIDILAR 349
           L +L+L ++L + S  +   + +   LE L         G +    +PE  V EI  L+ 
Sbjct: 312 LSLLVLALILLVTS--YYSAKRLTEPLEALETGIVDFSKGLIKRLQKPEGVVREIATLSH 369

Query: 350 SFNEMAQALERDRVERVRTEAELREARSQSEIANHAKSLFLANMS 394
            FNEMA+ LE    ER +   + R  R  + I   +   F  +M+
Sbjct: 370 KFNEMAEVLE----EREQALLDSRGNRFATLIDGMSDKSFYCSMT 410