Pairwise Alignments

Query, 762 a.a., integral membrane sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1047 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  273 bits (698), Expect = 3e-77
 Identities = 175/414 (42%), Positives = 238/414 (57%), Gaps = 25/414 (6%)

Query: 358 LERDRVERVRTEAELREARSQSEIANHAKSLFLANMSHELRTPLNGLLGMLQLIKGNEDA 417
           L RD  ER   E EL++A+  +E AN AK  FLANMSHE+RTP+NG+LGM  L   +   
Sbjct: 508 LFRDITERKHAELELQQAKEAAESANRAKGEFLANMSHEIRTPMNGILGMTDLALDSALT 567

Query: 418 NERDAYLDLAQRSGRRLTDLLGDLLDLSRIEAGGMRIQSRPFTLTSTFAALAETFSPMH- 476
            E+  YL++ + S   L  ++ D+LD S+IEAG + ++   F L      L ET  P+  
Sbjct: 568 PEQRDYLEMVKSSADALLVIINDILDFSKIEAGKLELEHIHFHLRQ---LLRETLKPLEL 624

Query: 477 QSKRVPLILAC--APEIPPVLVGDEVHLRQILFNLVGNAMKFTEKGEVRLEVFPLPPMPS 534
           ++++  L L C    E+    +GD   LRQ+L NLVGNA+KFTE+G+V + V       +
Sbjct: 625 RARQRSLTLRCEVPEEVADGYLGDPGRLRQVLINLVGNAIKFTEEGQVAVRV------EA 678

Query: 535 GEVRLLFIVTDTGIGIPDDKLDHIVRPFAQVEESYTRSHQGAGLGLAIVRNLVLAMGGTL 594
            +  L F V+DTGIGIP DK   I   F+Q + S TR   G GLGL I   LV  MGG +
Sbjct: 679 RDGLLHFAVSDTGIGIPADKQQLIFEAFSQADSSVTRRFGGTGLGLTICTRLVRLMGGHM 738

Query: 595 QFDSQVGEGTSVCMTMPFRLPDRTTHIAPQQDTPVGTAHGG------LRILLAEDDEVSR 648
             +S  G+G++      F    R   +A   ++    A  G      LR+L+AED+ V++
Sbjct: 739 WVESDPGQGST------FHFTARLEAVAGPAESGEADAGRGEVVLPPLRLLVAEDNPVNQ 792

Query: 649 LCARRLLEQMGHEVTTTANGAQALDALRAKRFDCVLMDVQMDVMDGVEATRQIRDGASGV 708
                LL++ GH VT   NG QAL AL    FD VLMD+QM VM G+EATR+IR   +  
Sbjct: 793 KLVLTLLQKRGHRVTLADNGQQALAALATDHFDLVLMDMQMPVMGGLEATRRIRAAEAAR 852

Query: 709 LDAR-IPVIAMTAYAMAGDREKFLAQGMDGYVSKPVMSAELAAAIAGALDLRKL 761
            D + +P++AMTA AMAGDRE  L  GMDGYVSKP+   E  +A+A  L   +L
Sbjct: 853 GDGQHLPIVAMTANAMAGDRELCLEAGMDGYVSKPLRRDEFFSAMADVLPPERL 906