Pairwise Alignments

Query, 762 a.a., integral membrane sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 858 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  248 bits (633), Expect = 1e-69
 Identities = 162/406 (39%), Positives = 218/406 (53%), Gaps = 13/406 (3%)

Query: 361 DRVERVRTEAELREARSQSEIANHAKSLFLANMSHELRTPLNGLLGMLQLIKGNEDANER 420
           D  ER   E+ELR AR ++E AN AKS FLANMSHE+RTP  G+LG+L L+       ++
Sbjct: 329 DVTERKAAESELRHAREKAEAANRAKSEFLANMSHEIRTPFTGILGVLDLLLHTPLNEKQ 388

Query: 421 DAYLDLAQRSGRRLTDLLGDLLDLSRIEAGGMRIQSRPFTLTSTFAALAETFSPMHQSKR 480
           + Y+ LA  S ++L  +L D+LD+S+IEAG + I      L      L E  +     K 
Sbjct: 389 ERYIRLAYGSTKQLLAILNDILDISKIEAGKLVIHPEEVDLVLLLGELTEVQAAAAAQKG 448

Query: 481 VPLILACAPEIPPVLVGDEVHLRQILFNLVGNAMKFTEKGEVRLEVFPLPPMPSGEVRLL 540
           +         IPP + GD V LRQI+ NL+ NA+KFT  G V L++     +  G   L 
Sbjct: 449 LEFRYHIKGIIPPKIHGDPVRLRQIMANLLNNAIKFTNSGWVELDI-ECTRIAPGRQHLR 507

Query: 541 FIVTDTGIGIPDDKLDHIVRPFAQVEESYTRSHQGAGLGLAIVRNLVLAMGGTLQFDSQV 600
             V D+GIG+P +  + I   F Q + S TR   G GLGL I + LV  M G++   S  
Sbjct: 508 VEVRDSGIGVPPELQETIFDKFTQADSSTTRLFGGTGLGLTICKQLVELMHGSIGVSSNS 567

Query: 601 GEGTSVCMTMPFRLPDRTTHIAPQQDTPVGTAHGGL----RILLAEDDEVSRLCARRLLE 656
           GEG+  C      LP+    ++P    P G+    L    RILL +D E +R      L 
Sbjct: 568 GEGS--CFWFDIELPESDPTVSPVPVLPAGSPITALPRDTRILLVDDTEANREVLAEYLA 625

Query: 657 QMGHEVTTTANGAQALDALRAKRFDCVLMDVQMDVMDGVEATRQIR--DGASGVLDARIP 714
           Q   +V   ANG +A+    + + D +LMD QM  MDG EATRQIR  +G       R P
Sbjct: 626 QAHCQVRQAANGLEAVTLAESWQPDAILMDCQMAGMDGYEATRQIRIQEGQR----RRTP 681

Query: 715 VIAMTAYAMAGDREKFLAQGMDGYVSKPVMSAELAAAIAGALDLRK 760
           +IA+TA+ M GDREK LA GMD Y+ KPV +  L A I   L+ R+
Sbjct: 682 IIALTAFVMRGDREKCLAAGMDDYLPKPVDAQTLIATIGKWLEGRE 727



 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 3/129 (2%)

Query: 624 QQDTPVGTAHGGLRILLAEDDEVSRLCARRLLEQMGHEVTTTANGAQALDALRAKRFDCV 683
           ++  P  T     RILL +D+   R  +  LLE +G +V + ++G +AL       FD V
Sbjct: 726 RETNPARTPRFSGRILLVDDNPEIREASTCLLEALGCQVQSASSGEEALQLGPEADFDLV 785

Query: 684 LMDVQMDVMDGVEATRQIRDGASGVLDARIPVIAMTAYAMAGDREKFLAQGMDGYVSKPV 743
           LMD +M  +DG   TR  R    G   A   +IA+TA      R +    GM+ +++KP 
Sbjct: 786 LMDCRMPGLDGCATTRAWRARERGTPTA---IIALTAGDPDESRAQCREAGMNDFLAKPF 842

Query: 744 MSAELAAAI 752
              EL   +
Sbjct: 843 SEQELVTLL 851