Pairwise Alignments

Query, 762 a.a., integral membrane sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 940 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  227 bits (578), Expect = 3e-63
 Identities = 148/422 (35%), Positives = 225/422 (53%), Gaps = 14/422 (3%)

Query: 340 GVTEI--DILARSFNEMAQALERDRVERVRTEA--ELREARSQSEIANHAKSLFLANMSH 395
           G+++I  DI AR   E      R R+E +  E   +L E +  +E AN AKS FLANMSH
Sbjct: 516 GISKIARDITARKAAEAELQRHRQRLEELVQERTRQLEELKDAAESANVAKSAFLANMSH 575

Query: 396 ELRTPLNGLLGMLQLIKGNEDANERDAYLDLAQRSGRRLTDLLGDLLDLSRIEAGGMRIQ 455
           E+RTPLN + G+  LI+      ++  ++D  + + + L  ++  +LDLS+IEAG   ++
Sbjct: 576 EIRTPLNAMTGLTHLIRRAGLKPQQAEHMDKLEAAAQHLLGVINAILDLSKIEAGKFALE 635

Query: 456 SRPFTLTSTFAALAETFSPMHQSKRVPLILACAPEIPPVLVGDEVHLRQILFNLVGNAMK 515
             P  + S    +A       Q+K + L     P +PP L+GD   L+Q L N  GNA+K
Sbjct: 636 EAPVRVESLLGNVASFLQERVQAKGLVLRTEAQP-LPPHLLGDPTRLQQALLNYAGNALK 694

Query: 516 FTEKGEVRLEVFPLPPMPSGEVRLLFIVTDTGIGIPDDKLDHIVRPFAQVEESYTRSHQG 575
           FTE+G + L V  L      +  L F V DTGIGIP + +  +   F Q + S TR + G
Sbjct: 695 FTEQGSITLRVHTLEE-GEADALLRFEVQDTGIGIPPEAMHKLFSAFEQADNSTTRRYGG 753

Query: 576 AGLGLAIVRNLVLAMGGTLQFDSQVGEGTSVCMTMPFRL-PDRTTHIAP----QQDTPVG 630
            GLGLAI R L   MGG     S+ G G++   T   +   +R  + AP      +  + 
Sbjct: 754 TGLGLAITRKLAQLMGGEAGASSEPGRGSTFWFTARLKKGKERYGNGAPLAGGNAEQRLR 813

Query: 631 TAHGGLRILLAEDDEVSRLCARRLLEQMGHEVTTTANGAQALDALRAKRFDCVLMDVQMD 690
               G  +LLAED+ +++   + +LE +G  V    +G  A++  R   +  +LMD+QM 
Sbjct: 814 QEFAGRTVLLAEDEPINQEITKFMLEDVGLRVELAPDGKVAVERARGNDYALILMDMQMP 873

Query: 691 VMDGVEATRQIRDGASGVLDARIPVIAMTAYAMAGDREKFLAQGMDGYVSKPVMSAELAA 750
           +MDG++ATR+IR         + P++AMTA A A D+ + L  GM+ +++KPV    L A
Sbjct: 874 LMDGLDATREIRQLQR---HRQTPILAMTANAFAEDKARCLGAGMNDFIAKPVNPDVLYA 930

Query: 751 AI 752
            +
Sbjct: 931 TL 932