Pairwise Alignments

Query, 762 a.a., integral membrane sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1281 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  243 bits (619), Expect = 6e-68
 Identities = 155/396 (39%), Positives = 229/396 (57%), Gaps = 13/396 (3%)

Query: 371  ELREARSQSEIANHAKSLFLANMSHELRTPLNGLLGMLQLIKGNE--DANERDAYLDLAQ 428
            EL EAR ++E A+ AKS FLANMSHE+RTP+N +LG+  L+ G E  DA  R+  +D   
Sbjct: 806  ELAEARDEAESASRAKSAFLANMSHEIRTPMNAILGLSHLL-GREVGDARARER-VDKIH 863

Query: 429  RSGRRLTDLLGDLLDLSRIEAGGMRIQSRPFTLTSTFAALAETFSPMHQSKRVPLILACA 488
             +   L +++ D+LDLS+IEA  + +  + F L   F        P  ++K + L     
Sbjct: 864  GAATHLLNIINDILDLSKIEAEKLHLDMQDFLLARLFDNAENLLRPQLEAKGLRLERHLD 923

Query: 489  PEIPPVLVGDEVHLRQILFNLVGNAMKFTEKGEVRLEVFPLPPMPSGEVRLLFIVTDTGI 548
            P +PPVL GD +HL+QIL N + NA+KF+++G + L    L    S +V L   V D GI
Sbjct: 924  PALPPVLRGDAMHLQQILVNFLSNAVKFSDQGHITLGARLLSRSQS-QVELRLEVADQGI 982

Query: 549  GIPDDKLDHIVRPFAQVEESYTRSHQGAGLGLAIVRNLVLAMGGTLQFDSQVGEGTSVCM 608
            GI  ++   + + F Q + S TR + G GLGLAI + L+  MGG +  DS+ G+G+   +
Sbjct: 983  GIAPEQQAALFQAFEQADNSTTRKYGGTGLGLAISKRLIRLMGGDIGVDSKPGQGSVFWI 1042

Query: 609  TMPFRLPDR---TTHIAPQQDTP--VGTAHGGLRILLAEDDEVSRLCARRLLEQMGHEVT 663
            ++   + D    TT    +Q+ P  +   HGG RILLAED+ +++  A+ LL   G  V+
Sbjct: 1043 SLRLEVADTAAGTTAATAEQELPARLRARHGGCRILLAEDNALNQEVAQDLLHDAGLAVS 1102

Query: 664  TTANGAQALDALRAKRFDCVLMDVQMDVMDGVEATRQIRDGASGVLDARIPVIAMTAYAM 723
               +G QA+   ++  FD VLMDV M  +DG++ATR IR+   G  D  +P++AMTA A 
Sbjct: 1103 VAEDGHQAVSLAQSGGFDLVLMDVNMPHLDGLQATRAIRE-LPGCAD--LPILAMTAGAF 1159

Query: 724  AGDREKFLAQGMDGYVSKPVMSAELAAAIAGALDLR 759
            A DR + L  GM+ +V+KPV+   L  A+   L  R
Sbjct: 1160 AEDRARCLEAGMNDFVAKPVVPEVLYQALLRWLPAR 1195