Pairwise Alignments

Query, 160 a.a., transcription elongation factor GreA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 158 a.a., transcription elongation factor GreA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  137 bits (345), Expect = 8e-38
 Identities = 74/157 (47%), Positives = 105/157 (66%), Gaps = 2/157 (1%)

Query: 1   MSSIPISTEGYDRLMKELERLKSER-PAIIQAIKEAREEGDLKENAGYDAARERQGMLEA 59
           M+ +P++  G ++L KEL+ LK ER P I +AI  ARE GDLKENA Y AARE QG+ EA
Sbjct: 1   MTKVPMTVVGAEQLRKELDMLKFERRPKITEAIASARELGDLKENAEYHAAREEQGICEA 60

Query: 60  RISYIESRMAQFNVINLDSL-SGDKVMFGATVEIEDLDSGEAKRYTLLGPDEADYAQGTI 118
           RI  IE +++   +I++  + +  +++FGATV I +LD+     Y ++G DEA+  +  I
Sbjct: 61  RIRDIEGKLSNAQIIDVTKMVNNGRIIFGATVTILNLDTDAEVTYRIVGDDEANIKENLI 120

Query: 119 SVLSPVARALLGKEEGDEIVVDAPRGRISYEIISVAF 155
           SV SP+AR L+GK EGDE+ +  P G   YEIISV +
Sbjct: 121 SVNSPIARGLVGKNEGDEVSITTPGGLTDYEIISVQY 157