Pairwise Alignments

Query, 362 a.a., glycine cleavage system T protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 364 a.a., glycine cleavage system T protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  194 bits (492), Expect = 4e-54
 Identities = 131/360 (36%), Positives = 189/360 (52%), Gaps = 30/360 (8%)

Query: 6   QTPLSAWHRAAGAKMAPFAGWDMPIQYPTGIIAEHVQTRESAALFDICHMGEFTLRGPGA 65
           +T L   H  + AKM  F GWDMP+ Y + I  EH   R+ A +FD+ HM    + G  A
Sbjct: 4   KTVLFNKHLESNAKMVDFHGWDMPLNYGSQI-EEHHAVRQDAGMFDVSHMTVVDVTGTDA 62

Query: 66  RDALSRAVSHNLETLK-PGRCRYGFLLNEAGGILDDLIVYCVAEDDYMLVVNGACTESDF 124
              L + +++++  LK PG+  YG +L++  GI+DDLI Y + +  Y +VVN A  E D 
Sbjct: 63  CAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFYRVVVNSATREKDL 122

Query: 125 AALRSRLPAVLPFEDISARTAKLDLQGPKSFDVLEAVLGESFRDL-----PYFGFRSVVF 179
           A +  +              A + +QGP +     AV             P+FG ++   
Sbjct: 123 AWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVFSSEQNAAIEGMKPFFGKQA--- 179

Query: 180 GGAPLLVSRTGYTGELGVELYLPWDKAEALWTALLADERVKPAGLGARDTLRLEVGLPLY 239
               L ++ TGYTGE G E+ +P  +AEALW ALL D+ VKP GLGARDTLRLE G+ LY
Sbjct: 180 --GSLFIATTGYTGEAGYEIIVPETEAEALWQALL-DQGVKPCGLGARDTLRLEAGMNLY 236

Query: 240 GHDLDDTHTPAEAGYGGMLT---NPADYVGKGADREVR----EPLVALSIPGRRSARHGD 292
           G D+D+T  P  A  G  +       D++G+ A   +R    + LV L +  +   RH  
Sbjct: 237 GLDMDETINPLAANMGWTIAWEPTDRDFIGRKALEALRDAGTDKLVGLVMEEKGVLRHDM 296

Query: 293 VVALPDGT---VAGVVTSGSFCPSLGYAVALARVAAAHAEAPTFVVKAAKVELEATRVAL 349
            V   D       GV+TSG+F P+LGY++A+ARV       P+ +   A+VE+   RVA+
Sbjct: 297 PVFFTDAAGVEQQGVITSGTFSPTLGYSIAMARV-------PSSIGDTAEVEMRKKRVAV 349