Pairwise Alignments

Query, 557 a.a., AMP-dependent synthetase and ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 539 a.a., AMP-dependent synthetase from Herbaspirillum seropedicae SmR1

 Score =  268 bits (686), Expect = 3e-76
 Identities = 193/534 (36%), Positives = 266/534 (49%), Gaps = 20/534 (3%)

Query: 24  PDTFNFAFDVLDPIAAADPGRLCIAHVDDAGVRRDYTFAWMAEASAKLANALRLRGIRKG 83
           P  FN A    D  A    GR  I   D  G    Y++  +   S + ANALR  G+ +G
Sbjct: 19  PTHFNIAQAACDRWADGS-GRTAIICEDADGSVTSYSYDQLKILSDRFANALRAAGVGRG 77

Query: 84  DRVMLVLYRRIEFWVSMLALHRLGAVAIPAPAQLTPKDIVFRVERAKTRCVIVDHSITER 143
           DR+ + L +RIE  ++ LA ++LGA+ +P      P  I +R++ +    ++ D S  E+
Sbjct: 78  DRIGIYLSQRIETVITHLAAYKLGAITVPLFYLFGPDAIAYRLDNSGAVALVTDASGMEK 137

Query: 144 VEAARPDCPGLAV--CVQVGGDALPRGWVDYDTIFT-PAEARFPRPESPLEFAGGEDPLL 200
              A  + P L +  CV+     LP+    +D +   PAE      +  L  A  +DP +
Sbjct: 138 ATLAG-ELPALRLVFCVESSDLVLPQTTDFWDRLHAAPAEL-----DPVLTLA--DDPAM 189

Query: 201 IFFSSGTTGMPKMVEHVHTYPLGHLLTGMYWHDLVP--GDLHLTLADTGWGKAVWGKFYG 258
           I ++SGTTG  K   H H   LGHL      HD  P  GD   T AD  W   +      
Sbjct: 190 IIYTSGTTGKAKGALHAHRVLLGHLPGVEVSHDSFPQEGDRFWTPADWAWIGGLLDVLLP 249

Query: 259 QWMAGASVFVYDFRGKFEPAALLDVLAAHAVTTFCAPPTVYRFLV-RQDLSAYDLSKLRH 317
               G +V       KF+ A +  +LA H +     PPT  + L     + A     LR 
Sbjct: 250 SLYHGVAVVARRLE-KFDAAEVFGLLARHQIRNVFFPPTALKMLRGAATVRAQADFSLRS 308

Query: 318 CTTAGELLNDSVFHDWKAATGLEIHEGYGQTETTLQIATLP-CMTPKAGSIGRPMPGWDV 376
             + GE L D +    + A G+ I+E YGQTE  L +++   C    +GS+GR +PG  V
Sbjct: 309 VASGGETLGDDLIAWGREALGVTINEFYGQTECNLVVSSSSHCYPSVSGSMGRAVPGHVV 368

Query: 377 VLQDAAGNICPPGEEGEICVRVAEGLPVGLFRGYLEEPEKTASVMFGGYYHTGDKAWMDE 436
            + D  G + P G  G I +R  +  PV +F  Y    E T     G +  TGD   MDE
Sbjct: 369 QIVDEQGQVLPHGTVGNIAIRAPD--PV-MFLRYWRNEEATREKFAGDFLLTGDLGSMDE 425

Query: 437 DGYYWFLGRVDDLIKSSGYRIGPFEVESALVAHPAVVEAAVTGVPDPLRGQAVKATVVLA 496
            GY  +LGR DD+I S+GYRIGP  +E  L+ HPAV  AAV GV D LR + VKA VVL 
Sbjct: 426 QGYIRYLGRNDDVITSAGYRIGPAAIEECLMRHPAVRIAAVVGVKDALRTEVVKAFVVLK 485

Query: 497 AGYTASDALTKELQDHVKKVTAPYKYPRIIDYVAELPKTISGKIKRAEIRERDQ 550
            G T  +AL  ELQ HV+   A ++YPR+I +VA LP T +GKI R  ++E DQ
Sbjct: 486 DGVTPDEALKAELQQHVRAQLAAHEYPRLISFVAALPTTATGKIMRKTLKEMDQ 539