Pairwise Alignments

Query, 591 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 1027 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score =  257 bits (657), Expect = 1e-72
 Identities = 171/574 (29%), Positives = 303/574 (52%), Gaps = 13/574 (2%)

Query: 14   DLIQTILADRVYLVRSIGAWILQIILERGFKIPEKLIIESIAGFDDPNMEIRQDCAIFYN 73
            +L+++IL D +YLVR+IG WIL+I+++   K+PE++I+E I   + P  E+R +  +  N
Sbjct: 452  ELVKSILHDEIYLVRNIGIWILRILVKYNIKLPERIILEVIHDLNSPYWELRFEYYLLLN 511

Query: 74   KLIKKYPEILKNSEISSKLQGSLTTKYFTDHFTVIRTICEDTLKLIPESKELIGYESKNL 133
            +L++K PE+L     +SK++  L + Y  +++   +   +  L  I   K L     K  
Sbjct: 512  ELLEKRPELLTEFNTASKIKSILGSHYVNENYPPFKIAIKSILDKI--LKNLENTPKKFQ 569

Query: 134  EEKFKTL--EKALDHPELNKSVVIRLKVKLKSYIRSEDSENIVKILEFIEKQELTEEYFD 191
            EE    L  E+  ++P  + + + +LK+ L SYI   D +NI+K+L F++  E   +   
Sbjct: 570  EELSGELYSEQLFENPVTSAAFLEKLKINLDSYILKNDEKNILKVLTFLKTHESKVDCSY 629

Query: 192  LFHELFKLKKDFEIAGELLKRLKNKFSEVPKSREAIIYGNLNEMIISRRINAVNEIFEYI 251
            L  EL KLK  ++ A   L  +KN++  +PK  E  I  +LN  I   + + + EI  Y+
Sbjct: 630  LLEELVKLKDTYQDANYFLNNIKNRYKLIPKPLEIRILNSLNNPIPEYKKDGLEEIITYL 689

Query: 252  LEGYKISERITRKIKEFVIYPQATPKITELSLKILEKIDTEESKKIFEEKQELENYI--L 309
             EG+KI+  I  KIKE ++      K+T+L + IL      ESK++  EK+E + ++  L
Sbjct: 690  NEGFKINNGIGLKIKEILVM-YRDEKLTDLCINILNLQKDIESKRLIFEKREFDTHLNDL 748

Query: 310  ENNFESEVVDIKNQTWQEIYFSLKYLLTHDYKTLNYVDLEFLDFMKFSILNSERNSLIIT 369
            ++  E    +IK  T +E+Y  L   L H     +Y  + F D + F    S+R S+I+T
Sbjct: 749  KDIKEKSDENIKKMTTEELYVKLSSQL-HKTSEYDYQSINFNDILYFLSDYSKRPSVILT 807

Query: 370  IILLDIFKANLKSGDTNLMYELGKYKKSVLNNIFKIIFNEKYPLLAYKGLECLKVIITKK 429
             ++L I K  +   ++N++         VL N++ +I++  Y +L+   +     I+  K
Sbjct: 808  TMILKILKNVITDPNSNILNSPDIDNPKVLENLYYLIYSTDYEILSKNAIILTVEIVKHK 867

Query: 430  TSWFEESVLN-AENFEEYLPL-ISKLLDENEPQIQVEALETLASMVKLNVKCTEHPEISK 487
              W   ++ N +EN  +  PL ++ LLD  + ++  E +       K +       E  +
Sbjct: 868  PEWLLRNITNVSENKSKNWPLFLNSLLDYPDDKVLEETINAFNYYAKNSNSFDLSSEFLE 927

Query: 488  KVLELISDDKKWIIFKKALEVIYSCNFEDNLEMLEKVSNQIIEYLKTSNDDSKLFLIKFF 547
            K++  + D   W  FKK ++V+   N+E + +ML + S  ++E ++ SNDDSKL L++FF
Sbjct: 928  KLVNRL-DTSNWENFKKIVKVL--GNYEMDEKMLNRFSKLLLEKIENSNDDSKLILLRFF 984

Query: 548  KIKGIDKIPDYLFDELKTFETSSNPYVSSEIAEL 581
            KI+ I ++   L  +L   + S N  +  +I E+
Sbjct: 985  KIQDISRLNSNLVAQLLNLKNSKNYDIKRDIEEI 1018