Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 352 a.a., TPR domain protein from Pseudomonas fluorescens FW300-N2E2

 Score = 47.4 bits (111), Expect = 3e-10
 Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 45  KAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLY 104
           KA    E+A++L PD+  A+     + D +G  E A   L + L+ +P + ++ + LG++
Sbjct: 194 KAQRALEQALRLQPDNLPALVMQIEVLDKQGQSEAARLLLARQLQTQPASAYLQHALGMW 253

Query: 105 YLNHDDN-MAIGCFEKALRIDPEN 127
            L H  N  A+    KA+ ++PEN
Sbjct: 254 LLQHGQNEYAVLGLAKAVELEPEN 277



 Score = 25.4 bits (54), Expect = 0.001
 Identities = 16/50 (32%), Positives = 23/50 (46%)

Query: 52  KAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNL 101
           + ++  P  A     LG      G  E A   L KA+E+EP+N    Y+L
Sbjct: 235 RQLQTQPASAYLQHALGMWLLQHGQNEYAVLGLAKAVELEPENRHYRYDL 284



 Score = 22.7 bits (47), Expect = 0.007
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 43  NDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEP 92
           N+ A+    KA++L P++ +    L T    E + E A + L + ++  P
Sbjct: 260 NEYAVLGLAKAVELEPENRHYRYDLATTLHAEQEVEAAQKQLQEIVQRYP 309