Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 568 a.a., FIG140336: TPR domain protein from Pseudomonas fluorescens FW300-N2E2

 Score = 37.0 bits (84), Expect = 6e-07
 Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 6/123 (4%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPW----MYY 99
           DKA    ++A+K  PDD N +     L +   D  +  + L   ++ +P N      + Y
Sbjct: 400 DKAWNVLQQALKQYPDDLNLLYTRAMLAEKRNDLAQMEKDLRLIIQRDPDNAMALNALGY 459

Query: 100 NLGLYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINP 159
            L      +D+   +   E+A +I+PE+      LG+  + +G+   ++    +A E  P
Sbjct: 460 TLSDRTTRYDEAKVL--IEQAHQINPEDPAVLDSLGWVNFRLGNLDEAERLLRQALERFP 517

Query: 160 KDQ 162
             +
Sbjct: 518 DQE 520



 Score = 28.5 bits (62), Expect = 2e-04
 Identities = 21/84 (25%), Positives = 39/84 (46%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGL 103
           D+A    E+A ++NP+D   +  LG +    G+ ++A   L +ALE  P      +   +
Sbjct: 469 DEAKVLIEQAHQINPEDPAVLDSLGWVNFRLGNLDEAERLLRQALERFPDQEVAAHLGEV 528

Query: 104 YYLNHDDNMAIGCFEKALRIDPEN 127
            + N     A   + K L+  P++
Sbjct: 529 LWANGKQREARQIWSKFLKDQPDS 552



 Score = 23.5 bits (49), Expect = 0.007
 Identities = 15/63 (23%), Positives = 27/63 (42%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGL 103
           D+A+   EK+IK  PDD         +       + A    +  ++  P++  + Y+L L
Sbjct: 230 DEALPLLEKSIKKYPDDKRLRLTYARMLVENNRMDDAKVEFSSLVQQYPEDDELRYSLAL 289

Query: 104 YYL 106
             L
Sbjct: 290 VCL 292