Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 347 a.a., Tfp pilus assembly protein PilF from Pseudomonas stutzeri RCH2

 Score = 45.1 bits (105), Expect = 1e-09
 Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 24/140 (17%)

Query: 43  NDKAIEY-YEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKA-------------- 87
           ND+  E  + + +   PD+ +A++ +G L   + D+++A   L KA              
Sbjct: 98  NDQLAELAFTEVLAKQPDNLDALTEMGMLSLSQRDQDRARGLLHKAVSLDQRRQGVAIGE 157

Query: 88  -------LEMEPKNPWMYYN-LG-LYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTY 138
                  L ++ ++P   YN LG L  LN+   ++ G ++ AL+I+P +    + LGY+Y
Sbjct: 158 TLPEPQALNVDQQSPLRLYNALGVLADLNNRFALSEGYYQLALKIEPRSLLAQNSLGYSY 217

Query: 139 YDIGDYTNSKLNFEKAYEIN 158
           Y  G + +++  F +A + N
Sbjct: 218 YLAGRWQDAERTFRRALDQN 237



 Score = 39.7 bits (91), Expect = 6e-08
 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 1/101 (0%)

Query: 29  QEMAEIGFAYIGIDNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKAL 88
           Q M     AY   D D+++  Y +A++L P   +A+ ++G ++   G+ + A    T+ L
Sbjct: 51  QAMQLAALAYRAGDLDQSLFQYLRAMELEPKRQDALVWVGRIHRERGNDQLAELAFTEVL 110

Query: 89  EMEPKNPWMYYNLGLYYLN-HDDNMAIGCFEKALRIDPENE 128
             +P N      +G+  L+  D + A G   KA+ +D   +
Sbjct: 111 AKQPDNLDALTEMGMLSLSQRDQDRARGLLHKAVSLDQRRQ 151



 Score = 25.4 bits (54), Expect = 0.001
 Identities = 16/55 (29%), Positives = 25/55 (45%)

Query: 49  YYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGL 103
           YY+ A+K+ P    A + LG  Y   G  + A     +AL+       ++ N GL
Sbjct: 195 YYQLALKIEPRSLLAQNSLGYSYYLAGRWQDAERTFRRALDQNGSYTPLWRNYGL 249



 Score = 22.7 bits (47), Expect = 0.007
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 133 QLGYTYYDIGDYTNSKLNFEKAYEINPKDQ 162
           QL    Y  GD   S   + +A E+ PK Q
Sbjct: 54  QLAALAYRAGDLDQSLFQYLRAMELEPKRQ 83