Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 363 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 50.8 bits (120), Expect = 3e-11
 Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 1/112 (0%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGL 103
           + AI  Y++AI L    A A +  G     +G   +A  +  +++ ++P     +  LG 
Sbjct: 115 EDAIASYQQAIALAAHYAQAWANCGFALWQQGRYREAVRHYEQSVAIDPDQSSAWRQLGQ 174

Query: 104 YYLNHDD-NMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKA 154
            YL+ D  + A+ C ++A+ + P+    W+  G+  Y++G Y  +  ++E A
Sbjct: 175 IYLSVDQPDQALRCLDQAIALQPQQATAWTWRGHALYNLGQYAAALTSYENA 226



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 1/117 (0%)

Query: 45  KAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLY 104
           +A+E YE+A+ ++       +  G +    G  E A     +A+ +       + N G  
Sbjct: 82  EAVESYEQALAIDRQQPEVWNNRGIVLRKLGRLEDAIASYQQAIALAAHYAQAWANCGFA 141

Query: 105 YLNHDD-NMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPK 160
                    A+  +E+++ IDP+    W QLG  Y  +     +    ++A  + P+
Sbjct: 142 LWQQGRYREAVRHYEQSVAIDPDQSSAWRQLGQIYLSVDQPDQALRCLDQAIALQPQ 198



 Score = 26.2 bits (56), Expect = 7e-04
 Identities = 12/49 (24%), Positives = 23/49 (46%)

Query: 114 IGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKDQ 162
           +  ++  LR +P N   W+  G     +  +T +  ++  A EI P+ Q
Sbjct: 16  LAAYDFRLRHEPRNCTLWNNRGILLERLNRWTEALASYNCALEITPQRQ 64