Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 287 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 2/127 (1%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLG- 102
           D AI   EKA KL+P +   +  LG+    +G+  +A  +L + L ++P +    ++LG 
Sbjct: 93  DPAIAALEKAQKLSPREPAILFALGSARFRQGNYSEAASFLQRGLAIKPDSSGALFDLGN 152

Query: 103 LYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKDQ 162
           +Y +      AI  F+KA+++ P+     + LG   Y+ GD   +   + +A E++ KD 
Sbjct: 153 VYLIQKQYPPAIAAFQKAVQVKPDFWEAINNLGLVSYEQGDRNQALNYWNRAIELS-KDA 211

Query: 163 YSDMIEK 169
              ++ K
Sbjct: 212 AEPVLAK 218