Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 295 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 54.7 bits (130), Expect = 1e-12
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)

Query: 37  AYIGIDN--------DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKAL 88
           AYIG  N        D A   + KAI+L+  D  A    G +Y       +A E  +KA+
Sbjct: 148 AYIGRGNLYRQANQLDAAFNDFNKAIELDTADPRAYHNRGLIYQARNQHAQAIEDFSKAI 207

Query: 89  EMEPKNPWMYYNLGLYYL-NHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNS 147
            + P +P  Y   G+ Y+   DD+ A   F  A+ ++ +    W+     Y   GD   +
Sbjct: 208 SLSPSSPEPYNGRGISYVAQGDDDNAFSDFNTAINLNGKLAESWANQALIYERRGDKAKA 267

Query: 148 KLNFEKAYEINPK 160
             ++  A  ++PK
Sbjct: 268 AKSYSHALSLDPK 280



 Score = 53.9 bits (128), Expect = 2e-12
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 1/116 (0%)

Query: 46  AIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLYY 105
           A+  Y  A+++NP+   A    G LY      + A+    KA+E++  +P  Y+N GL Y
Sbjct: 131 ALADYNAALQINPNYDVAYIGRGNLYRQANQLDAAFNDFNKAIELDTADPRAYHNRGLIY 190

Query: 106 LNHDDN-MAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPK 160
              + +  AI  F KA+ + P +   ++  G +Y   GD  N+  +F  A  +N K
Sbjct: 191 QARNQHAQAIEDFSKAISLSPSSPEPYNGRGISYVAQGDDDNAFSDFNTAINLNGK 246



 Score = 42.0 bits (97), Expect = 1e-08
 Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 9/159 (5%)

Query: 5   LLIFLILMSTCF-AGCFEQNNLEKSQEMAEIGFAYIGIDNDKAIEYYEKAIKLNPDDANA 63
           L  FL+L S    AGC      +K + M  +  A    +N   I      I  NP D   
Sbjct: 28  LAAFLVLGSALLIAGC----QTDKPESMFRVERAQGSEEN---IASLSSVIASNPSDPEG 80

Query: 64  ISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLYYLN-HDDNMAIGCFEKALR 122
            +  G+ Y   G+  +A     +A+++ P+    Y N  L   N  +   A+  +  AL+
Sbjct: 81  YNVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRALVQRNLGNQQAALADYNAALQ 140

Query: 123 IDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKD 161
           I+P  +  +   G  Y        +  +F KA E++  D
Sbjct: 141 INPNYDVAYIGRGNLYRQANQLDAAFNDFNKAIELDTAD 179