Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 609 a.a., signal peptide protein from Sinorhizobium meliloti 1021

 Score = 47.8 bits (112), Expect = 4e-10
 Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 4/121 (3%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLG-TLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLG 102
           +KA   + KA++LNPD    +++LG +  D   + E   E + KA+E++P + ++  +LG
Sbjct: 445 EKAEPNFRKALELNPDQPQVLNYLGYSWVDMNINLEDGLEMIRKAVELKPDDGYIVDSLG 504

Query: 103 LYY--LNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPK 160
             Y  +N  D  A+   E+A  +   +      LG  Y+ +G    +   + +A E+ P+
Sbjct: 505 WAYFRMNRFDE-AVTELERAAELMAGDATINDHLGDAYWRVGRKLEAVFQWNQALELKPE 563

Query: 161 D 161
           +
Sbjct: 564 E 564



 Score = 39.7 bits (91), Expect = 1e-07
 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 2/96 (2%)

Query: 68  GTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLYYLNHDDNMAIG--CFEKALRIDP 125
           G  Y+ +   EKA     KALE+ P  P +   LG  +++ + N+  G     KA+ + P
Sbjct: 435 GIAYERQKLWEKAEPNFRKALELNPDQPQVLNYLGYSWVDMNINLEDGLEMIRKAVELKP 494

Query: 126 ENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKD 161
           ++      LG+ Y+ +  +  +    E+A E+   D
Sbjct: 495 DDGYIVDSLGWAYFRMNRFDEAVTELERAAELMAGD 530



 Score = 35.0 bits (79), Expect = 2e-06
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 24  NLEKSQEMAEIGFAYI--GIDNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAY 81
           N ++ Q +  +G++++   I+ +  +E   KA++L PDD   +  LG  Y      ++A 
Sbjct: 458 NPDQPQVLNYLGYSWVDMNINLEDGLEMIRKAVELKPDDGYIVDSLGWAYFRMNRFDEAV 517

Query: 82  EYLTKALEMEPKNPWMYYNLGLYYLNHDDNM-AIGCFEKALRIDPE 126
             L +A E+   +  +  +LG  Y      + A+  + +AL + PE
Sbjct: 518 TELERAAELMAGDATINDHLGDAYWRVGRKLEAVFQWNQALELKPE 563



 Score = 31.2 bits (69), Expect = 3e-05
 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGL 103
           ++AIE Y+   + +P    +   LG    G G  ++A ++L   ++++PKN   Y   G 
Sbjct: 338 EEAIELYKSVPESSPMRRLSELQLGLSLAGIGKVDEAKKHLKGLIDVDPKNIRNYLAYGS 397

Query: 104 YYLNHDDNMAIG-CFEKALR-IDP-ENECCWS---QLGYTYYDIGDYTNSKLNFEKAYEI 157
              +  +   +G  +++A+  I P      W+   Q G  Y     +  ++ NF KA E+
Sbjct: 398 VLSDAKNYKEMGELYDRAVAAIGPVPKRSDWTVFFQRGIAYERQKLWEKAEPNFRKALEL 457

Query: 158 NP 159
           NP
Sbjct: 458 NP 459



 Score = 25.8 bits (55), Expect = 0.001
 Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 2/113 (1%)

Query: 51  EKAIKLNPDDANAISF-LGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLYYLN-H 108
           E+ ++     A A+ F +G   + EG  +    YL  A  ++P++  +   LG    N  
Sbjct: 276 EQQVRNAVQGAAAVLFSIGGALNREGAEDIVSLYLQTARRLDPESADILVMLGGIAENLK 335

Query: 109 DDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPKD 161
               AI  ++      P       QLG +   IG    +K + +   +++PK+
Sbjct: 336 KPEEAIELYKSVPESSPMRRLSELQLGLSLAGIGKVDEAKKHLKGLIDVDPKN 388