Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 1200 a.a., TonB-dependent receptor protein from Sinorhizobium meliloti 1021

 Score = 45.8 bits (107), Expect = 3e-09
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 2/120 (1%)

Query: 42  DNDKAIEYYEKAIKLNPDDANAISFLGTL-YDGEGDREKAYEYLTKALEMEPKNPWMYYN 100
           D D+  +  E+A+ ++PDD  A+       Y  + D E A   L +AL+  P +  ++ +
Sbjct: 388 DRDELRDGVERALSIDPDDPTALEARAHYRYHIDNDLEGALADLERALKTAPGSSSIWNS 447

Query: 101 LGLYYLNHDDNMAI-GCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINP 159
           LGL      DN A    F++A+ +DP +    + L   Y D      +K   + A  ++P
Sbjct: 448 LGLVQGARGDNRAAEAAFKQAIALDPLDPVSHANLAIQYMDEMRMAEAKREIDAALSVDP 507



 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 14/131 (10%)

Query: 42  DNDKAIEYYEKAIKLNPDDAN---AISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWM- 97
           D   AI   +KA +  PDD     A + L  L D   DR++  + + +AL ++P +P   
Sbjct: 354 DIPAAIAVIKKAEQQYPDDPTLPAARAQLALLLD---DRDELRDGVERALSIDPDDPTAL 410

Query: 98  ----YYNLGLYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEK 153
               +Y    Y++++D   A+   E+AL+  P +   W+ LG      GD   ++  F++
Sbjct: 411 EARAHYR---YHIDNDLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQ 467

Query: 154 AYEINPKDQYS 164
           A  ++P D  S
Sbjct: 468 AIALDPLDPVS 478



 Score = 37.0 bits (84), Expect = 1e-06
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 9/91 (9%)

Query: 41  IDNDK--AIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMY 98
           IDND   A+   E+A+K  P  ++  + LG +    GD   A     +A+ ++P +P  +
Sbjct: 420 IDNDLEGALADLERALKTAPGSSSIWNSLGLVQGARGDNRAAEAAFKQAIALDPLDPVSH 479

Query: 99  YNLGLYYLNHDDNMAIG----CFEKALRIDP 125
            NL + Y+   D M +       + AL +DP
Sbjct: 480 ANLAIQYM---DEMRMAEAKREIDAALSVDP 507



 Score = 28.9 bits (63), Expect = 3e-04
 Identities = 17/52 (32%), Positives = 25/52 (48%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNP 95
           DKA+E        NP  +NA   L   +  +GDR  A + L  A  ++P +P
Sbjct: 527 DKAVEDLLAGSTANPAYSNAQLLLAAAHYEKGDRIPAAQALDNADRLDPNDP 578