Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 393 a.a., TPR repeat-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 49.7 bits (117), Expect = 6e-11
 Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 5/131 (3%)

Query: 36  FAYIGIDNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEM-EPKN 94
           + Y G+D D+A   Y+ A+  + +D NA+   G L   + DR + +  + K LE+   +N
Sbjct: 248 YRYKGLD-DRAESLYKLALSRDSEDMNALFNYGVLLASQ-DRLEEWAKVHKTLELVRIRN 305

Query: 95  PWMYYNLGLY-YLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEK 153
           P+ YY++    Y  H+   A+  +++A+         +  L   Y+  GD   +KLN +K
Sbjct: 306 PYYYYDMAQQAYSEHEYQTALTWYKRAVEKADYRHEFYFGLSRAYWATGDERRAKLNMQK 365

Query: 154 AYEINPKDQYS 164
           A  ++  D+Y+
Sbjct: 366 ALSLS-VDEYN 375