Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 384 a.a., TPR repeat-containing protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 46.2 bits (108), Expect = 7e-10
 Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 1/106 (0%)

Query: 50  YEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGL-YYLNH 108
           +E+++ L+P  A A S LG +++ +G  +KA     +ALE  P++  ++ N G+   +  
Sbjct: 156 FERSLALDPRLAGAASHLGAIHNYQGQPDKALALFVRALEQMPRSGELHNNAGIAQAMLG 215

Query: 109 DDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKA 154
           +D  A+  F  A+         W+ +G +   +G Y  +   F  A
Sbjct: 216 NDAAAVDHFRAAITYGAPGNRVWNNMGLSLCRLGRYDEAFEAFRNA 261



 Score = 39.3 bits (90), Expect = 8e-08
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 3/105 (2%)

Query: 59  DDANAISFL--GTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLYYLNHDDNM-AIG 115
           D  NA   L  G ++  +   E A+E  ++A +++PK     Y  G   +     + A  
Sbjct: 61  DTMNAQEHLQRGLIFLSQDRPELAFEQFSRACQLDPKLAEARYQRGALLVARGVPIEARA 120

Query: 116 CFEKALRIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEINPK 160
             E AL + P+N   W   G   +  G+ T +K  FE++  ++P+
Sbjct: 121 DIEAALSLAPDNARAWETAGMLSFAEGNLTEAKSRFERSLALDPR 165



 Score = 35.4 bits (80), Expect = 1e-06
 Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 2/141 (1%)

Query: 22  QNNLEKSQEMAEIGFAYIGIDNDK-AIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKA 80
           Q +   +QE  + G  ++  D  + A E + +A +L+P  A A    G L    G   +A
Sbjct: 59  QADTMNAQEHLQRGLIFLSQDRPELAFEQFSRACQLDPKLAEARYQRGALLVARGVPIEA 118

Query: 81  YEYLTKALEMEPKNPWMYYNLG-LYYLNHDDNMAIGCFEKALRIDPENECCWSQLGYTYY 139
              +  AL + P N   +   G L +   +   A   FE++L +DP      S LG  + 
Sbjct: 119 RADIEAALSLAPDNARAWETAGMLSFAEGNLTEAKSRFERSLALDPRLAGAASHLGAIHN 178

Query: 140 DIGDYTNSKLNFEKAYEINPK 160
             G    +   F +A E  P+
Sbjct: 179 YQGQPDKALALFVRALEQMPR 199



 Score = 25.8 bits (55), Expect = 0.001
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 44  DKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPK 93
           D+A E +  A      +A A + LG     +G+   A  +L +ALE+EP+
Sbjct: 252 DEAFEAFRNA----GGEAAAHNNLGVYLSQQGEHALALYHLQRALEVEPR 297