Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 395 a.a., TPR domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 5/120 (4%)

Query: 42  DNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEM-EPKNPWMYYN 100
           D  +A + Y  A+K +PDD   +  L  + D +G R + +  + K LE+   +NP+ YY+
Sbjct: 259 DEKRAEQVYRYALKFDPDDMTTLFNLAVILDNQG-RLEEWAQIHKKLELARIRNPYYYYD 317

Query: 101 LG-LYYLNHDDNMAIGCFEKAL-RIDPENECCWSQLGYTYYDIGDYTNSKLNFEKAYEIN 158
           +G   Y  H    A+  +++A+ + D  +E  +  L  TY+ +GD   +K N EKA  ++
Sbjct: 318 MGEQAYDEHQYREALAWYQRAVDKADYRHEFFFG-LSRTYWALGDEKRAKQNMEKALALS 376