Pairwise Alignments

Query, 174 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 207 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 49.3 bits (116), Expect = 4e-11
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 10/148 (6%)

Query: 23  NNLEKSQEMAEIGFAYIGI-----DNDKAIEYYEKAIKLNPDDANAISFLGTLYDGEGDR 77
           N +  S  +AE      GI     D +  + Y E+A +  P    A S +G ++   G+ 
Sbjct: 51  NAVRNSPRLAEAYVQLGGICLQRGDLEGCLRYNEEAAQSRPKFPVAWSNIGFVHLQRGEP 110

Query: 78  EKAYEYLTKALEMEPKNPWMYYNLG-LYYLNHDDNMAIGCFEKALRIDPENECCWSQLGY 136
           EKA   L KAL+ +P        +G  +Y+  D    I    +A++ +P     ++ L  
Sbjct: 111 EKAIAALKKALKWQPDFIQAMATMGAAFYMEGDYEACINISNEAIKKEPSFGPAYNNLAL 170

Query: 137 TYYDIGDYTNS----KLNFEKAYEINPK 160
            Y+++GD+  S     L  E  +E+ P+
Sbjct: 171 AYFELGDFAKSVKFADLAMENGFEVRPE 198



 Score = 44.7 bits (104), Expect = 1e-09
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 1/100 (1%)

Query: 46  AIEYYEKAIKLNPDDANAISFLGTLYDGEGDREKAYEYLTKALEMEPKNPWMYYNLGLYY 105
           A E +  A++ +P  A A   LG +    GD E    Y  +A +  PK P  + N+G  +
Sbjct: 45  AEESFLNAVRNSPRLAEAYVQLGGICLQRGDLEGCLRYNEEAAQSRPKFPVAWSNIGFVH 104

Query: 106 LNH-DDNMAIGCFEKALRIDPENECCWSQLGYTYYDIGDY 144
           L   +   AI   +KAL+  P+     + +G  +Y  GDY
Sbjct: 105 LQRGEPEKAIAALKKALKWQPDFIQAMATMGAAFYMEGDY 144